RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 KDELR2P33947 212 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 ARL1P40616 181 aaPredicted RBP4.59□□□□□ -1.67
CKS1B-201ENST00000308987 NSG1P42857 185 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 MAPK9P45984 424 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 ASMTP46597 345 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 SLC6A12P48065 614 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 ALDH9A1P49189 494 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 CLK3P49761 638 aaKnown RBP4.59□□□□□ -1.67
CKS1B-201ENST00000308987 EIF2B2P49770 351 aaKnown RBP4.59□□□□□ -1.67
CKS1B-201ENST00000308987 DAPP51397 102 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 IST1P53990 364 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 PNLIPRP1P54315 467 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 AP1S2P56377 157 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 YPEL5P62699 121 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 B4GALNT1Q00973 533 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 NPRL3Q12980 569 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 SGCGQ13326 291 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 NFATC2Q13469 925 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 GBX1Q14549 363 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 PTGR1Q14914 329 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 HKDC1Q2TB90 917 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 TIMM50Q3ZCQ8 353 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 ZNF404Q494X3 552 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 IQCCQ4KMZ1 466 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 FBXO48Q5FWF7 155 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 PAGE2BQ5JRK9 111 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 LDLRAP1Q5SW96 308 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 C10orf62Q5T681 223 aaPredicted RBP4.59□□□□□ -1.67
CKS1B-201ENST00000308987 DEPDC1Q5TB30 811 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 ANXA8L1Q5VT79 327 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 SLX4IPQ5VYV7 408 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 LIPJQ5W064 366 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.59□□□□□ -1.67
CKS1B-201ENST00000308987 PNCKQ6P2M8 343 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 SUSD1Q6UWL2 747 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 USP43Q70EL4 1123 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 CXXC5Q7LFL8 322 aaKnown RBP4.59□□□□□ -1.67
CKS1B-201ENST00000308987 CAMKMTQ7Z624 323 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 TMEM179BQ7Z7N9 219 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 CYP4Z1Q86W10 505 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 SERPINA9Q86WD7 417 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 C17orf82Q86X59 251 aaPredicted RBP4.59□□□□□ -1.67
CKS1B-201ENST00000308987 PLD3Q8IV08 490 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 RASGRP3Q8IV61 690 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 KLHDC8AQ8IYD2 350 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 ZZZ3Q8IYH5 903 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 GPR135Q8IZ08 494 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 CADM3Q8N126 398 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 PAF1Q8N7H5 531 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 ZNF540Q8NDQ6 660 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 OR8J2Q8NGG1 315 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 MCFD2Q8NI22 146 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 ZFP90Q8TF47 636 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 PIH1D2Q8WWB5 315 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 SGCDQ92629 289 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 MYDGFQ969H8 173 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 ESAMQ96AP7 390 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 CXorf40BQ96DE9 158 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 ZHX1-C8orf76Q96EF9 292 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 PPP1R16AQ96I34 528 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 GFM1Q96RP9 751 aaKnown RBP4.59□□□□□ -1.67
CKS1B-201ENST00000308987 CTRCQ99895 268 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 EGFL8Q99944 293 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 WRAP53Q9BUR4 548 aaKnown RBP4.59□□□□□ -1.67
CKS1B-201ENST00000308987 APOOQ9BUR5 198 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 BTBD2Q9BX70 525 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 DGCR6LQ9BY27 220 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 ITPAQ9BY32 194 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 ACPTQ9BZG2 426 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 SLIRPQ9GZT3 109 aaKnown RBP4.59□□□□□ -1.67
CKS1B-201ENST00000308987 CCDC90BQ9GZT6 254 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 RACGAP1Q9H0H5 632 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 SLC25A18Q9H1K4 315 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 DSN1Q9H410 356 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 IKZF5Q9H5V7 419 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 PIF1Q9H611 641 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 REEP1Q9H902 201 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 FGF22Q9HCT0 170 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 SARS2Q9NP81 518 aaKnown RBP4.59□□□□□ -1.67
CKS1B-201ENST00000308987 KRT84Q9NSB2 600 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 FKBP14Q9NWM8 211 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 GPRC5BQ9NZH0 403 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 NPAP1Q9NZP6 1156 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 ERVK-18Q9QC07 812 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 KLQ9UEF7 1012 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 BTNL2Q9UIR0 455 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 MKLN1Q9UL63 735 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 GPR34Q9UPC5 381 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 PADI2Q9Y2J8 665 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 PPIL1Q9Y3C6 166 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 LOXL2Q9Y4K0 774 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 OR1A2Q9Y585 309 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 KLK4Q9Y5K2 254 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 PEX16Q9Y5Y5 336 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 RNF215Q9Y6U7 377 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 V9GYQ6 96 aa4.59□□□□□ -1.67
CKS1B-201ENST00000308987 HIVEP1P15822 2718 aa4.59□□□□□ -1.68
CKS1B-201ENST00000308987 A0A075B6Q4 140 aa4.58□□□□□ -1.68
CKS1B-201ENST00000308987 GLYATL1P3A0A0U1RQE8 302 aa4.58□□□□□ -1.68
CKS1B-201ENST00000308987 ARRDC5A6NEK1 342 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms