RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 OR7G2Q8NG99 324 aa11.97□□□□□ -0.49
USP38-201ENST00000307017 OR51Q1Q8NH59 317 aa11.97□□□□□ -0.49
USP38-201ENST00000307017 HOXB13Q92826 284 aaPredicted RBP11.97□□□□□ -0.49
USP38-201ENST00000307017 CDS1Q92903 461 aa11.97□□□□□ -0.49
USP38-201ENST00000307017 ZUFSPQ96AP4 578 aa11.97□□□□□ -0.49
USP38-201ENST00000307017 SLC29A3Q9BZD2 475 aa11.97□□□□□ -0.49
USP38-201ENST00000307017 SLAMF8Q9P0V8 285 aa11.97□□□□□ -0.49
USP38-201ENST00000307017 OR52A4PA6NMU1 304 aa11.97□□□□□ -0.49
USP38-201ENST00000307017 H3BUI4 141 aa11.97□□□□□ -0.49
USP38-201ENST00000307017 PRAMEF11O60813 436 aa11.97□□□□□ -0.49
USP38-201ENST00000307017 UPK1BO75841 260 aa11.97□□□□□ -0.49
USP38-201ENST00000307017 FKBP1AP62942 108 aaKnown RBP11.97□□□□□ -0.49
USP38-201ENST00000307017 PAFAH1B3Q15102 231 aaKnown RBP11.97□□□□□ -0.49
USP38-201ENST00000307017 GRHL2Q6ISB3 625 aa11.97□□□□□ -0.49
USP38-201ENST00000307017 PACRGLQ8N7B6 248 aa11.97□□□□□ -0.49
USP38-201ENST00000307017 PSKH2Q96QS6 385 aa11.97□□□□□ -0.49
USP38-201ENST00000307017 DDX31Q9H8H2 851 aaKnown RBP11.97□□□□□ -0.49
USP38-201ENST00000307017 TMEM248Q9NWD8 314 aa11.97□□□□□ -0.49
USP38-201ENST00000307017 SLCO3A1Q9UIG8 710 aa11.97□□□□□ -0.49
USP38-201ENST00000307017 CA5BQ9Y2D0 317 aa11.97□□□□□ -0.49
USP38-201ENST00000307017 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.96□□□□□ -0.49
USP38-201ENST00000307017 CDK1P06493 297 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 FAM163BP0C2L3 166 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 PLP2Q04941 152 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 PLAC9Q5JTB6 97 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 FJX1Q86VR8 437 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 VRK2Q86Y07 508 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 CPOQ8IVL8 374 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 SMOC2Q9H3U7 446 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 TMED5Q9Y3A6 229 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 PCDHGB2Q9Y5G2 931 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 IER3IP1Q9Y5U9 82 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 E9PI62 339 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 FAAHO00519 579 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 POLR1CO15160 346 aaPredicted RBP11.96□□□□□ -0.49
USP38-201ENST00000307017 PRKRAO75569 313 aaKnown RBP11.96□□□□□ -0.49
USP38-201ENST00000307017 SIX6O95475 246 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 ZNF84P51523 738 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 CXCR4P61073 352 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 MVKQ03426 396 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 SOX4Q06945 474 aaPredicted RBP11.96□□□□□ -0.49
USP38-201ENST00000307017 FAM110CQ1W6H9 321 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 HIST2H3PS2Q5TEC6 136 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 METAP1DQ6UB28 335 aaPredicted RBP11.96□□□□□ -0.49
USP38-201ENST00000307017 HERPUD2Q9BSE4 406 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 RAB11FIP5Q9BXF6 653 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 RPS10-NUDT3A0A1W2PQS6 291 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 ANKRD34BA5PLL1 514 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 C2orf72A6NCS6 295 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 DVL2O14641 736 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 EEDO75530 441 aaKnown RBP11.96□□□□□ -0.49
USP38-201ENST00000307017 S1PR4O95977 384 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 LCATP04180 440 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 TIA1P31483 386 aaKnown RBP eCLIP11.96□□□□□ -0.49
USP38-201ENST00000307017 RPS10P46783 165 aaKnown RBP11.96□□□□□ -0.49
USP38-201ENST00000307017 GALNT2Q10471 571 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 GPR33Q49SQ1 333 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 BCL7AQ4VC05 210 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 PAN3Q58A45 887 aaKnown RBP11.96□□□□□ -0.49
USP38-201ENST00000307017 LRRC25Q8N386 305 aaPredicted RBP11.96□□□□□ -0.49
USP38-201ENST00000307017 SUSD3Q96L08 255 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 PINK1Q9BXM7 581 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 TMEM59LQ9UK28 342 aa11.96□□□□□ -0.49
USP38-201ENST00000307017 RNGTTO60942 597 aaKnown RBP11.96□□□□□ -0.5
USP38-201ENST00000307017 CBSLP0DN79 551 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 CBSP35520 551 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 GABRA2P47869 451 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 TAS2R43P59537 309 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 NTHL1P78549 312 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 DLX2Q07687 328 aaPredicted RBP11.96□□□□□ -0.5
USP38-201ENST00000307017 LSAMPQ13449 338 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 RFTN1Q14699 578 aaPredicted RBP11.96□□□□□ -0.5
USP38-201ENST00000307017 NSDHLQ15738 373 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 AAK1Q2M2I8 961 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 KIAA1211LQ6NV74 962 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 GKN2Q86XP6 184 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 OR5D18Q8NGL1 313 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 PRR14Q9BWN1 585 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 H3BNC9 293 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 AQP7O14520 342 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 FADS1O60427 444 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 C1GALT1C1LP0DN25 315 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 C21orf33P30042 268 aaPredicted RBP11.96□□□□□ -0.5
USP38-201ENST00000307017 GSCP56915 257 aaPredicted RBP11.96□□□□□ -0.5
USP38-201ENST00000307017 RPS18P62269 152 aaKnown RBP11.96□□□□□ -0.5
USP38-201ENST00000307017 HSD11B2P80365 405 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 SELPLGQ14242 412 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 KHDC1LQ5JSQ8 128 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 BPHLQ86WA6 291 aaPredicted RBP11.96□□□□□ -0.5
USP38-201ENST00000307017 NECAP1Q8NC96 275 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 OR14L1PQ8NHC6 308 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 THAP7Q9BT49 309 aaPredicted RBP11.96□□□□□ -0.5
USP38-201ENST00000307017 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.96□□□□□ -0.5
USP38-201ENST00000307017 LOC102724200A0A096LPH7 203 aaPredicted RBP11.96□□□□□ -0.5
USP38-201ENST00000307017 HHLA1C9JL84 531 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 NDUFV2P19404 249 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 GSTM4Q03013 218 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 C14orf28Q4W4Y0 310 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 YIF1BQ5BJH7 314 aa11.96□□□□□ -0.5
USP38-201ENST00000307017 C10orf62Q5T681 223 aaPredicted RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms