RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 PCDHGB2Q9Y5G2 931 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 H0Y8X5 98 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 RNGTTO60942 597 aaKnown RBP12.06□□□□□ -0.48
HIF3A-204ENST00000300862 APODP05090 189 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 LIMS3P0CW19 117 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 LIMS4P0CW20 117 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 GSTM3P21266 225 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 AHRP35869 848 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 OMPP47874 163 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 RGS8P57771 180 aaPredicted RBP12.06□□□□□ -0.48
HIF3A-204ENST00000300862 SIM1P81133 766 aaPredicted RBP12.06□□□□□ -0.48
HIF3A-204ENST00000300862 FABP5Q01469 135 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 GNA13Q14344 377 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 TRAM2Q15035 370 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 KLHL22Q53GT1 634 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 ZNF438Q7Z4V0 828 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 VN1R4Q7Z5H5 301 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 OR52P1PQ8NH57 321 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 LCN9Q8WX39 176 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 HERVK_113Q902F9 699 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 GIMAP5Q96F15 307 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 FYTTD1Q96QD9 318 aaKnown RBP12.06□□□□□ -0.48
HIF3A-204ENST00000300862 APOOQ9BUR5 198 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 SRRQ9GZT4 340 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 MMP28Q9H239 520 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 RANGRFQ9HD47 186 aaPredicted RBP12.06□□□□□ -0.48
HIF3A-204ENST00000300862 RWDD3Q9Y3V2 267 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 CSNK1G3Q9Y6M4 447 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 DOCK8Q8NF50 2099 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 ZNF860A6NHJ4 632 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 HMX3A6NHT5 357 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 FAM183AA6NL82 134 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 GPR89AB7ZAQ6 455 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.06□□□□□ -0.48
HIF3A-204ENST00000300862 ADH1BP00325 375 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 GPR89BP0CG08 455 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 FUT1P19526 365 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 CMPK1P30085 196 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 GNG2P59768 71 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 PPP2CBP62714 309 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 PPP2CAP67775 309 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 TSPAN31Q12999 210 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 YIF1BQ5BJH7 314 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 C3orf38Q5JPI3 329 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 SLC25A30Q5SVS4 291 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 PLEKHM3Q6ZWE6 761 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 MTSS1LQ765P7 747 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 MFSD9Q8NBP5 474 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 ADAMTS15Q8TE58 950 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 ZFPM2Q8WW38 1151 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 DIRAS2Q96HU8 199 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 MCHR1Q99705 422 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 ARHGDIGQ99819 225 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 RAB11FIP5Q9BXF6 653 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 MALT1Q9UDY8 824 aa12.06□□□□□ -0.48
HIF3A-204ENST00000300862 A0A0B4J293 547 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 NCR1O76036 304 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 CDH11P55287 796 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 ST3GAL3Q11203 375 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 RAB40BQ12829 278 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 ZNF791Q3KP31 576 aaPredicted RBP12.05□□□□□ -0.48
HIF3A-204ENST00000300862 DEFB134Q4QY38 66 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 RNLSQ5VYX0 342 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 ZNF425Q6IV72 752 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 LYPD8Q6UX82 237 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 AMIGO1Q86WK6 493 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 LINC00471Q8N535 108 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 IL17RCQ8NAC3 791 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 SLC7A6Q92536 515 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 FGF14Q92915 247 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 RNF31Q96EP0 1072 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 KCTD7Q96MP8 289 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 SLC38A2Q96QD8 506 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 KATNB1Q9BVA0 655 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 TMED9Q9BVK6 235 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 HDHD5Q9BXW7 423 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 BEX2Q9BXY8 128 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 SLA2Q9H6Q3 261 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 SFXN1Q9H9B4 322 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 TBC1D17Q9HA65 648 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 CD93Q9NPY3 652 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 GDE1Q9NZC3 331 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 SF3B6Q9Y3B4 125 aaKnown RBP12.05□□□□□ -0.48
HIF3A-204ENST00000300862 SYNDIG1LA6NDD5 238 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 FABP12A6NFH5 140 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 CDC42EP2O14613 210 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 ABATP80404 500 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 BNC1Q01954 994 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 PLK5Q496M5 336 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 ZNF776Q68DI1 518 aaPredicted RBP12.05□□□□□ -0.48
HIF3A-204ENST00000300862 PARM1Q6UWI2 310 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 GDF7Q7Z4P5 450 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 NRROSQ86YC3 692 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 PIGXQ8TBF5 258 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 PHOSPHO2Q8TCD6 241 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 ACTRT3Q9BYD9 372 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 COMMD3Q9UBI1 195 aa12.05□□□□□ -0.48
HIF3A-204ENST00000300862 NUFIP1Q9UHK0 495 aaKnown RBP12.05□□□□□ -0.48
HIF3A-204ENST00000300862 PRUNE2Q8WUY3 3088 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms