RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 WACQ9BTA9 647 aa22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 HINT3Q9NQE9 182 aaKnown RBP22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 NPIPA5A0A0B4J1W7 369 aa22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 NPIPA7E9PJI5 369 aa22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 NPIPA8P0DM63 369 aa22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 PEBP1P30086 187 aaKnown RBP22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 SYCE2Q6PIF2 218 aa22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 ZNF485Q8NCK3 441 aa22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 CDS1Q92903 461 aa22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 SLC6A17Q9H1V8 727 aa22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 SIRT4Q9Y6E7 314 aaPredicted RBP22.81■■□□□ 1.24
SPTSSA-201ENST00000298130 SURF4O15260 269 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 CPNE3O75131 537 aaKnown RBP22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 GKN3PP0CG01 181 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 VASNQ6EMK4 673 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 GDF7Q7Z4P5 450 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 NR2C2APQ86WQ0 139 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 TMEFF1Q8IYR6 380 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 YIPF7Q8N8F6 280 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 TMEM74BQ9NUR3 256 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 SLC7A7Q9UM01 511 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 ALG5Q9Y673 324 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 EYSQ5T1H1 3165 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 ISM1B1AKI9 464 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 KDM4EB2RXH2 506 aaPredicted RBP22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 FAM25AB3EWG3 89 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 FAM25CB3EWG5 89 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 FAM25GB3EWG6 89 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 ASGR2P07307 311 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 F3P13726 295 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 MAP2K3P46734 347 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 ST3GAL3Q11203 375 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 PPP2R2DQ66LE6 453 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 PLBD1Q6P4A8 553 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 TTTY10Q9BZA0 68 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 RNF32Q9H0A6 362 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 TRIM45Q9H8W5 580 aaPredicted RBP22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 CES1P1Q9UKY3 287 aa22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 EXOSC1Q9Y3B2 195 aaKnown RBP22.8■■□□□ 1.24
SPTSSA-201ENST00000298130 PRG2P13727 222 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 HSD17B2P37059 387 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 HTRA4P83105 476 aaPredicted RBP22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 CSTF1Q05048 431 aaKnown RBP22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 AADACL4Q5VUY2 407 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 SLC48A1Q6P1K1 146 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 RASSF6Q6ZTQ3 369 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 HDDC3Q8N4P3 179 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 OR4E2Q8NGC2 313 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 AP3S1Q92572 193 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 PPP1R3EQ9H7J1 279 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 TBXA2RP21731 343 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 SLC16A1P53985 500 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 PRR5P85299 388 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 GPR68Q15743 365 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 IDNKQ5T6J7 187 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 AGBL4Q5VU57 503 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 THOC7Q6I9Y2 204 aaKnown RBP22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 KIAA1211LQ6NV74 962 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 PSRC1Q6PGN9 363 aaPredicted RBP22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 OR2L3Q8NG85 312 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 OR7G2Q8NG99 324 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 ZCCHC10Q8TBK6 192 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 ADAMTS15Q8TE58 950 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 GANCQ8TET4 914 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 UPRTQ96BW1 309 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 CHFRQ96EP1 664 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 HCAR1Q9BXC0 346 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 DPH1Q9BZG8 443 aa22.79■■□□□ 1.24
SPTSSA-201ENST00000298130 SNTNA6NMZ2 147 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 CASC3O15234 703 aaKnown RBP22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 EMC8O43402 210 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 RPS5P46782 204 aaKnown RBP22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 ZIC1Q15915 447 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 ZNF57Q68EA5 555 aaPredicted RBP22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 ASB18Q6ZVZ8 466 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 ARIH2OSQ8N7S6 290 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 SLC41A3Q96GZ6 507 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 ZNF649Q9BS31 505 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 PPIL3Q9H2H8 161 aaKnown RBP22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 FAM240BA0A1B0GVZ2 78 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 REM1O75628 298 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 MRPL3P09001 348 aaKnown RBP22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 MPIP34949 423 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 GCGRP47871 477 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 BHLHB9Q6PI77 547 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 TMEM91Q6ZNR0 172 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 RAB42Q8N4Z0 105 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 OR2L5Q8NG80 312 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 NT5DC2Q9H857 520 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 ATP13A2Q9NQ11 1180 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 MRPS18AQ9NVS2 196 aaKnown RBP22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 CBLCQ9ULV8 474 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 ZFR2Q9UPR6 939 aaKnown RBP22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 SPEGQ15772 3267 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 CARNS1A5YM72 827 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 VASPP50552 380 aaPredicted RBP22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 SIM1P81133 766 aaPredicted RBP22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 FZD5Q13467 585 aa22.78■■□□□ 1.24
SPTSSA-201ENST00000298130 KLHL12Q53G59 568 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms