RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 ASPNQ9BXN1 380 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 POLDIP3Q9BY77 421 aaKnown RBP10.98□□□□□ -0.65
RHO-201ENST00000296271 TPSD1Q9BZJ3 242 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 RACGAP1Q9H0H5 632 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 MMP27Q9H306 513 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 TBCCD1Q9NVR7 557 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 LYARQ9NX58 379 aaKnown RBP10.98□□□□□ -0.65
RHO-201ENST00000296271 TOR4AQ9NXH8 423 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 ENOPH1Q9UHY7 261 aa10.98□□□□□ -0.65
RHO-201ENST00000296271 CASC3O15234 703 aaKnown RBP10.97□□□□□ -0.65
RHO-201ENST00000296271 ADAM11O75078 769 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 RDH16O75452 317 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 ZNF136P52737 540 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 ILF3Q12906 894 aaKnown RBP eCLIP10.97□□□□□ -0.65
RHO-201ENST00000296271 KIR2DS3Q14952 304 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 SUZ12Q15022 739 aaKnown RBP10.97□□□□□ -0.65
RHO-201ENST00000296271 NNATQ16517 81 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 ZNF628Q5EBL2 1059 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 HEPHL1Q6MZM0 1159 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 NIPAL1Q6NVV3 410 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 CDC73Q6P1J9 531 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 UTS2BQ765I0 119 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 SPATC1Q76KD6 591 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 TAF8Q7Z7C8 310 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 PHC2Q8IXK0 858 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 OR2L13Q8N349 312 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 METTL27Q8N6F8 245 aaPredicted RBP10.97□□□□□ -0.65
RHO-201ENST00000296271 OR4N2Q8NGD1 307 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 OR9Q1Q8NGQ5 310 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 OR9A4Q8NGU2 314 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 RNFT2Q96EX2 444 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 TOE1Q96GM8 510 aaKnown RBP10.97□□□□□ -0.65
RHO-201ENST00000296271 SLC41A3Q96GZ6 507 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 MSLNLQ96KJ4 702 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 MS4A4EQ96PG1 132 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 ZFYVE21Q9BQ24 234 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 GPR174Q9BXC1 333 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 IL21RQ9HBE5 538 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 TESQ9UGI8 421 aaKnown RBP10.97□□□□□ -0.65
RHO-201ENST00000296271 RPL36Q9Y3U8 105 aaKnown RBP10.97□□□□□ -0.65
RHO-201ENST00000296271 KLK4Q9Y5K2 254 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 WDFY4Q6ZS81 3184 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 B4DGG1 531 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 UBXN7O94888 489 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 PIPP12273 146 aaPredicted RBP10.97□□□□□ -0.65
RHO-201ENST00000296271 TUBA1BP68363 451 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 MAT1AQ00266 395 aaKnown RBP10.97□□□□□ -0.65
RHO-201ENST00000296271 NCF4Q15080 339 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 OCLNQ16625 522 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 SLC35F1Q5T1Q4 408 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 FHL5Q5TD97 284 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 SMARCD3Q6STE5 483 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 PLEKHG7Q6ZR37 379 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 TUBA1AQ71U36 451 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 TRIM69Q86WT6 500 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 AVL9Q8NBF6 648 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 NLGN4YQ8NFZ3 816 aaPredicted RBP10.97□□□□□ -0.65
RHO-201ENST00000296271 SAMD8Q96LT4 415 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 SERINC2Q96SA4 455 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 SDHCQ99643 169 aaPredicted RBP10.97□□□□□ -0.65
RHO-201ENST00000296271 DPH1Q9BZG8 443 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 NXF2Q9GZY0 626 aaKnown RBP10.97□□□□□ -0.65
RHO-201ENST00000296271 MARCH7Q9H992 704 aa10.97□□□□□ -0.65
RHO-201ENST00000296271 SPIN1Q9Y657 262 aaPredicted RBP10.97□□□□□ -0.65
RHO-201ENST00000296271 ALPK2Q86TB3 2170 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 LINC00854A0A1B0GVQ3 168 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 CYR61O00622 381 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 SOCS6O14544 535 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 TNFSF14O43557 240 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 UPK1BO75841 260 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 PORP16435 677 aaPredicted RBP10.96□□□□□ -0.65
RHO-201ENST00000296271 MAOBP27338 520 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 NDUFS1P28331 727 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 MAZP56270 477 aaKnown RBP10.96□□□□□ -0.65
RHO-201ENST00000296271 FXYD6P3P58550 94 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 RPS25P62851 125 aaKnown RBP10.96□□□□□ -0.65
RHO-201ENST00000296271 DUSP8Q13202 625 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 CCINQ13939 588 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 TRAM2Q15035 370 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 C22orf42Q6IC83 251 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 SLC27A4Q6P1M0 643 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 RRM2BQ7LG56 351 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 ZNF614Q8N883 585 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 ANKK1Q8NFD2 765 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 KBTBD8Q8NFY9 601 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 C9orf43Q8TAL5 461 aaPredicted RBP10.96□□□□□ -0.65
RHO-201ENST00000296271 TEX47Q8TBZ9 253 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 ZNF229Q9UJW7 825 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 LIPT1Q9Y234 373 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 DTX4Q9Y2E6 619 aa10.96□□□□□ -0.65
RHO-201ENST00000296271 TGFBR3LH3BV60 316 aa10.96□□□□□ -0.66
RHO-201ENST00000296271 MYL12BO14950 172 aa10.96□□□□□ -0.66
RHO-201ENST00000296271 RGS5O15539 181 aa10.96□□□□□ -0.66
RHO-201ENST00000296271 ZGLP1P0C6A0 271 aa10.96□□□□□ -0.66
RHO-201ENST00000296271 MAKP20794 623 aa10.96□□□□□ -0.66
RHO-201ENST00000296271 DRD1P21728 446 aa10.96□□□□□ -0.66
RHO-201ENST00000296271 AZGP1P25311 298 aaKnown RBP10.96□□□□□ -0.66
RHO-201ENST00000296271 AKT2P31751 481 aa10.96□□□□□ -0.66
RHO-201ENST00000296271 SMSP52788 366 aa10.96□□□□□ -0.66
RHO-201ENST00000296271 RHAGQ02094 409 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms