RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 ZNF624Q9P2J8 865 aaPredicted RBP25.72■■□□□ 1.71
CBX4-201ENST00000269397 MGAT4AQ9UM21 535 aa25.72■■□□□ 1.71
CBX4-201ENST00000269397 A0A0A6YYD5 115 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 FUT1P19526 365 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 PLA1AQ53H76 456 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 ZNF697Q5TEC3 545 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 LINC00615Q96LM1 132 aaPredicted RBP25.71■■□□□ 1.71
CBX4-201ENST00000269397 SAMD8Q96LT4 415 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 COQ7Q99807 217 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 WASH6PQ9NQA3 447 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 MAN2B1O00754 1011 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 PTBP1P26599 531 aaKnown RBP eCLIP25.71■■□□□ 1.71
CBX4-201ENST00000269397 PKLRP30613 574 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 ESCO2Q56NI9 601 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 WDR45BQ5MNZ6 344 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 C9orf64Q5T6V5 341 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 SMARCD3Q6STE5 483 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 OR11H7Q8NGC8 314 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 SLC38A1Q9H2H9 487 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 ATP13A2Q9NQ11 1180 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 ATG4BQ9Y4P1 393 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 A0A1W2PPV9 198 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 CDC42EP2O14613 210 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 CASC3O15234 703 aaKnown RBP25.71■■□□□ 1.71
CBX4-201ENST00000269397 FCMRO60667 390 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 THY1P04216 161 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 PGGHGQ32M88 737 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 PLBD1Q6P4A8 553 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 LINC01555Q8NAE3 123 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 ZNF431Q8TF32 576 aaPredicted RBP25.71■■□□□ 1.71
CBX4-201ENST00000269397 RASD1Q9Y272 281 aa25.71■■□□□ 1.71
CBX4-201ENST00000269397 A0A0G2JPF8 293 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 HNRNPCL2B2RXH8 293 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 HNRNPCL3B7ZW38 293 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 IGHA1P01876 353 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 HNRNPCL4P0DMR1 293 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 ST3GAL3Q11203 375 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 C18orf63Q68DL7 685 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 OR5M3Q8NGP4 307 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 OSTF1Q92882 214 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 ZNF514Q96K75 400 aaPredicted RBP25.7■■□□□ 1.7
CBX4-201ENST00000269397 OR7D2Q96RA2 312 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 ZDHHC4Q9NPG8 344 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 ASB6Q9NWX5 421 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 EXOGQ9Y2C4 368 aaKnown RBP25.7■■□□□ 1.7
CBX4-201ENST00000269397 SCO1O75880 301 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 RGS9O75916 674 aaPredicted RBP25.7■■□□□ 1.7
CBX4-201ENST00000269397 HTR1FP30939 366 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 BTCP35070 178 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 MLC1Q15049 377 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 ZBTB37Q5TC79 503 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 OR8H3Q8N146 312 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 TMEM99Q8N816 258 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 OR11H4Q8NGC9 324 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 OR52N1Q8NH53 320 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 OR5K2Q8NHB8 316 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 ZSWIM3Q96MP5 696 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 ABHD1Q96SE0 405 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 NARFLQ9H6Q4 476 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 CYSLTR2Q9NS75 346 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 MOSPD1Q9UJG1 213 aa25.7■■□□□ 1.7
CBX4-201ENST00000269397 A0A1W2PR48 441 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 RFPL3O75679 317 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 TALDO1P37837 337 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 CLDN2P57739 230 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 CSNK1G2P78368 415 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 NTHL1P78549 312 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 TCEAL5Q5H9L2 206 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 ARL9Q6T311 187 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 PLEKHM3Q6ZWE6 761 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 C12orf40Q86WS4 652 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 LRRC17Q8N6Y2 441 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 SMAP2Q8WU79 429 aaPredicted RBP25.69■■□□□ 1.7
CBX4-201ENST00000269397 HSD17B8Q92506 261 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 OSGEPL1Q9H4B0 414 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 GPR34Q9UPC5 381 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 CXCL3P19876 107 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 MC3RP41968 323 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 NTRK2Q16620 822 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 TOR2AQ5JU69 321 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 BICRALQ6AI39 1079 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 KIAA0907Q7Z7F0 614 aaPredicted RBP25.69■■□□□ 1.7
CBX4-201ENST00000269397 LRIG1Q96JA1 1093 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 LGR4Q9BXB1 951 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 IL20Q9NYY1 176 aa25.69■■□□□ 1.7
CBX4-201ENST00000269397 LOC105369274A0A096LPK9 316 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 IGKV1-8A0A0C4DH67 115 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 LRIT2A6NDA9 550 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 BTN3A3O00478 584 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 GCGRP47871 477 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 RNF144AP50876 292 aaPredicted RBP25.68■■□□□ 1.7
CBX4-201ENST00000269397 TGM3Q08188 693 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 OR4N4Q8N0Y3 316 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 ZNF655Q8N720 491 aaPredicted RBP25.68■■□□□ 1.7
CBX4-201ENST00000269397 OR6C4Q8NGE1 309 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 TTC9Q92623 222 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 KAT2AQ92830 837 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 CAMK1GQ96NX5 476 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 MENTQ9BUN1 341 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 FOLH1BQ9HBA9 442 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms