RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 EPHA5P54756 1037 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 CDK3Q00526 305 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 ZNF155Q12901 538 aaPredicted RBP15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 KRT33BQ14525 404 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 ZNF234Q14588 700 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 IDNKQ5T6J7 187 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 FAM27D1Q5T7N8 215 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 CD300LDQ6UXZ3 194 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 ERN2Q76MJ5 926 aaKnown RBP15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 BADQ92934 168 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 INSM2Q96T92 566 aaPredicted RBP15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 HDHD2Q9H0R4 259 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 TMEM245Q9H330 911 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 POLMQ9NP87 494 aaPredicted RBP15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 TRPV5Q9NQA5 729 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 MBNL1Q9NR56 388 aaKnown RBP15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 CLEC4AQ9UMR7 237 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 CHST2Q9Y4C5 530 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 CHD9Q3L8U1 2897 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 HYAL3O43820 417 aaPredicted RBP15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 TSC22D2O75157 780 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 AIFM1O95831 613 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 GSTM3P21266 225 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 PPP3R1P63098 170 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 MLF2Q15773 248 aaPredicted RBP15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 YIF1BQ5BJH7 314 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 RNASE12Q5GAN4 147 aaKnown RBP15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 PLEKHM3Q6ZWE6 761 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 ACOT4Q8N9L9 421 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 IL17RCQ8NAC3 791 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 GNPDA2Q8TDQ7 276 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 SPATA5L1Q9BVQ7 753 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 SLC38A1Q9H2H9 487 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 TRIM45Q9H8W5 580 aaPredicted RBP15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 EXOSC1Q9Y3B2 195 aaKnown RBP15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 MRPS23Q9Y3D9 190 aaKnown RBP15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 GPSM3Q9Y4H4 160 aa15.5■□□□□ 0.07
HNRNPU-228ENST00000640306 SNTNA6NMZ2 147 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 ERVH48-1M5A8F1 160 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 RGS8P57771 180 aaPredicted RBP15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 DPTQ07507 201 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 TGM3Q08188 693 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 CAMK1Q14012 370 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 C6orf132Q5T0Z8 1188 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 METRNLQ641Q3 311 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 C16orf62Q7Z3J2 963 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 CPOQ8IVL8 374 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 GHDCQ8N2G8 530 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 RNF32Q9H0A6 362 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 IRF2BPLQ9H1B7 796 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 RBFOX1Q9NWB1 397 aaKnown RBP15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 MARK1Q9P0L2 795 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 PTGFRNQ9P2B2 879 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 ZFR2Q9UPR6 939 aaKnown RBP15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 ENTPD4Q9Y227 616 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 SZT2Q5T011 3432 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 A0A0G2JMP0 313 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 A0A0X1KG70 313 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 PLOD3O60568 738 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 IFI30P13284 250 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 MLLT3P42568 568 aaPredicted RBP15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 IL12RB1P42701 662 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 SLC16A1P53985 500 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 SNRPNP63162 240 aaKnown RBP15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 TSPAN31Q12999 210 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 ELAVL3Q14576 367 aaKnown RBP15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 NR2C2APQ86WQ0 139 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 SIRT6Q8N6T7 355 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 C12orf76Q8N812 135 aaPredicted RBP15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 OR4M2Q8NGB6 313 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 OR2A1Q8NGT9 310 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 SAMD8Q96LT4 415 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 FAIM2Q9BWQ8 316 aa15.49■□□□□ 0.07
HNRNPU-228ENST00000640306 CENPBD1B2RD01 187 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 CDC42EP2O14613 210 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 TBX19O60806 448 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 ZIC2O95409 532 aaPredicted RBP15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 PRKAR1AP10644 381 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 OMPP47874 163 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 PDX1P52945 283 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 FAPQ12884 760 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 TRAM2Q15035 370 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 SLC25A30Q5SVS4 291 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 FBXL6Q8N531 539 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 NUP43Q8NFH3 380 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 PIGXQ8TBF5 258 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 TTTY10Q9BZA0 68 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 HINT3Q9NQE9 182 aaKnown RBP15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 SIRT4Q9Y6E7 314 aaPredicted RBP15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 LANCL1O43813 399 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 PAK4O96013 591 aaPredicted RBP15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 THY1P04216 161 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 EVI2BP34910 448 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 EVX1P49640 407 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 BTBD16Q32M84 506 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 FCRLBQ6BAA4 426 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 PLBD1Q6P4A8 553 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 OR4N5Q8IXE1 308 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 NATD1Q8N6N6 113 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 DIO2Q92813 273 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms