RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 FAM110BQ8TC76 370 aa23.6■■□□□ 1.37
TRIM28-204ENST00000594806 MIPOL1Q8TD10 442 aa23.6■■□□□ 1.37
TRIM28-204ENST00000594806 PIK3R3Q92569 461 aa23.6■■□□□ 1.37
TRIM28-204ENST00000594806 DTNBP1Q96EV8 351 aa23.6■■□□□ 1.37
TRIM28-204ENST00000594806 THOC1Q96FV9 657 aaKnown RBP23.6■■□□□ 1.37
TRIM28-204ENST00000594806 G6PC3Q9BUM1 346 aa23.6■■□□□ 1.37
TRIM28-204ENST00000594806 HHATLQ9HCP6 504 aa23.6■■□□□ 1.37
TRIM28-204ENST00000594806 GTF3C1Q12789 2109 aa23.6■■□□□ 1.37
TRIM28-204ENST00000594806 HELZ2Q9BYK8 2649 aaKnown RBP23.6■■□□□ 1.37
TRIM28-204ENST00000594806 SPENQ96T58 3664 aaKnown RBP23.6■■□□□ 1.37
TRIM28-204ENST00000594806 GXYLT2A0PJZ3 443 aa23.59■■□□□ 1.37
TRIM28-204ENST00000594806 C9JVG2 144 aa23.59■■□□□ 1.37
TRIM28-204ENST00000594806 ICOSLGO75144 302 aa23.59■■□□□ 1.37
TRIM28-204ENST00000594806 UNC5CO95185 931 aa23.59■■□□□ 1.37
TRIM28-204ENST00000594806 CYP4B1P13584 511 aa23.59■■□□□ 1.37
TRIM28-204ENST00000594806 RFC3P40938 356 aa23.59■■□□□ 1.37
TRIM28-204ENST00000594806 CLK3P49761 638 aaKnown RBP23.59■■□□□ 1.37
TRIM28-204ENST00000594806 POU6F2P78424 691 aaPredicted RBP23.59■■□□□ 1.37
TRIM28-204ENST00000594806 MRPL49Q13405 166 aaKnown RBP23.59■■□□□ 1.37
TRIM28-204ENST00000594806 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.59■■□□□ 1.37
TRIM28-204ENST00000594806 OR9I1Q8NGQ6 314 aa23.59■■□□□ 1.37
TRIM28-204ENST00000594806 RMND5BQ96G75 393 aaPredicted RBP23.59■■□□□ 1.37
TRIM28-204ENST00000594806 ITCHQ96J02 903 aa23.59■■□□□ 1.37
TRIM28-204ENST00000594806 YIPF4Q9BSR8 244 aa23.59■■□□□ 1.37
TRIM28-204ENST00000594806 PLSCR2Q9NRY7 297 aa23.59■■□□□ 1.37
TRIM28-204ENST00000594806 CCDC154A6NI56 674 aa23.58■■□□□ 1.37
TRIM28-204ENST00000594806 PYCARD-AS1I3L0S3 204 aa23.58■■□□□ 1.37
TRIM28-204ENST00000594806 KCNK2O95069 426 aa23.58■■□□□ 1.37
TRIM28-204ENST00000594806 AGR2O95994 175 aa23.58■■□□□ 1.37
TRIM28-204ENST00000594806 MATN1P21941 496 aa23.58■■□□□ 1.37
TRIM28-204ENST00000594806 PTGDSP41222 190 aa23.58■■□□□ 1.37
TRIM28-204ENST00000594806 MAN2A2P49641 1150 aa23.58■■□□□ 1.37
TRIM28-204ENST00000594806 KCNK10P57789 538 aa23.58■■□□□ 1.37
TRIM28-204ENST00000594806 RCAN2Q14206 197 aa23.58■■□□□ 1.37
TRIM28-204ENST00000594806 SLC10A1Q14973 349 aa23.58■■□□□ 1.37
TRIM28-204ENST00000594806 CMPK2Q5EBM0 449 aa23.58■■□□□ 1.37
TRIM28-204ENST00000594806 BICRALQ6AI39 1079 aa23.58■■□□□ 1.37
TRIM28-204ENST00000594806 BLOC1S3Q6QNY0 202 aa23.58■■□□□ 1.37
TRIM28-204ENST00000594806 TMEM251Q8N6I4 163 aa23.58■■□□□ 1.37
TRIM28-204ENST00000594806 NEURL3Q96EH8 262 aa23.58■■□□□ 1.37
TRIM28-204ENST00000594806 CHMP6Q96FZ7 201 aa23.58■■□□□ 1.37
TRIM28-204ENST00000594806 SLC35G5Q96KT7 338 aa23.58■■□□□ 1.37
TRIM28-204ENST00000594806 JSRP1Q96MG2 331 aaPredicted RBP23.58■■□□□ 1.37
TRIM28-204ENST00000594806 SLC35A5Q9BS91 424 aa23.58■■□□□ 1.37
TRIM28-204ENST00000594806 LRRC3CA6NJW4 275 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 FAM166BA8MTA8 275 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 RFXANKO14593 260 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 AK1P00568 194 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 NGFRP08138 427 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 ZCCHC18P0CG32 403 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 NCF2P19878 526 aaPredicted RBP23.57■■□□□ 1.36
TRIM28-204ENST00000594806 EVI2BP34910 448 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 MAGEA8P43361 318 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 UQCRFS1P47985 274 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 TRPC1P48995 793 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 ARFIP2P53365 341 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 SAXO2Q658L1 398 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 TIGD3Q6B0B8 471 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 DESI1Q6ICB0 168 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 OR52N2Q8NGI0 321 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 OR1J4Q8NGS1 313 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 FBXO30Q8TB52 745 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 ZNF317Q96PQ6 595 aaPredicted RBP23.57■■□□□ 1.36
TRIM28-204ENST00000594806 TMEM120AQ9BXJ8 343 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 TSPAN10Q9H1Z9 355 aaPredicted RBP23.57■■□□□ 1.36
TRIM28-204ENST00000594806 ZNF703Q9H7S9 590 aaPredicted RBP23.57■■□□□ 1.36
TRIM28-204ENST00000594806 SERHLQ9NQF3 203 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 SDHAF3Q9NRP4 125 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 DNAJC13O75165 2243 aa23.57■■□□□ 1.36
TRIM28-204ENST00000594806 SNPHO15079 494 aa23.56■■□□□ 1.36
TRIM28-204ENST00000594806 IGHG3P01860 377 aa23.56■■□□□ 1.36
TRIM28-204ENST00000594806 CHI3L1P36222 383 aaPredicted RBP23.56■■□□□ 1.36
TRIM28-204ENST00000594806 ANXA11P50995 505 aaKnown RBP23.56■■□□□ 1.36
TRIM28-204ENST00000594806 ARHGAP11AQ6P4F7 1023 aa23.56■■□□□ 1.36
TRIM28-204ENST00000594806 ZNF621Q6ZSS3 439 aa23.56■■□□□ 1.36
TRIM28-204ENST00000594806 CDS1Q92903 461 aa23.56■■□□□ 1.36
TRIM28-204ENST00000594806 PHF12Q96QT6 1004 aa23.56■■□□□ 1.36
TRIM28-204ENST00000594806 OR7D2Q96RA2 312 aa23.56■■□□□ 1.36
TRIM28-204ENST00000594806 ACKR4Q9NPB9 350 aa23.56■■□□□ 1.36
TRIM28-204ENST00000594806 CCDC167Q9P0B6 97 aa23.56■■□□□ 1.36
TRIM28-204ENST00000594806 KLHL14Q9P2G3 628 aa23.56■■□□□ 1.36
TRIM28-204ENST00000594806 WIF1Q9Y5W5 379 aa23.56■■□□□ 1.36
TRIM28-204ENST00000594806 ZNF407Q9C0G0 2248 aa23.56■■□□□ 1.36
TRIM28-204ENST00000594806 FADS1O60427 444 aa23.55■■□□□ 1.36
TRIM28-204ENST00000594806 KRT75O95678 551 aa23.55■■□□□ 1.36
TRIM28-204ENST00000594806 MAGEA5P43359 124 aa23.55■■□□□ 1.36
TRIM28-204ENST00000594806 RFX3P48380 749 aa23.55■■□□□ 1.36
TRIM28-204ENST00000594806 EIF2S3LQ2VIR3 472 aaKnown RBP23.55■■□□□ 1.36
TRIM28-204ENST00000594806 TIGD2Q4W5G0 525 aa23.55■■□□□ 1.36
TRIM28-204ENST00000594806 FNDC7Q5VTL7 733 aa23.55■■□□□ 1.36
TRIM28-204ENST00000594806 ANGPTL8Q6UXH0 198 aa23.55■■□□□ 1.36
TRIM28-204ENST00000594806 FUNDC1Q8IVP5 155 aa23.55■■□□□ 1.36
TRIM28-204ENST00000594806 PRR7Q8TB68 274 aa23.55■■□□□ 1.36
TRIM28-204ENST00000594806 SPDL1Q96EA4 605 aa23.55■■□□□ 1.36
TRIM28-204ENST00000594806 INPP5KQ9BT40 448 aa23.55■■□□□ 1.36
TRIM28-204ENST00000594806 HOXD1Q9GZZ0 328 aa23.55■■□□□ 1.36
TRIM28-204ENST00000594806 DEFB127Q9H1M4 99 aa23.55■■□□□ 1.36
TRIM28-204ENST00000594806 EXD2Q9NVH0 621 aa23.55■■□□□ 1.36
TRIM28-204ENST00000594806 MYO18BQ8IUG5 2567 aa23.55■■□□□ 1.36
TRIM28-204ENST00000594806 SUSD5O60279 629 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms