RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ARSBP15848 533 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 TNK1Q13470 666 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 RIN1Q13671 783 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 HNRNPA1L2Q32P51 320 aaKnown RBP14.65□□□□□ -0.06
NUP88-207ENST00000573584 KLBQ86Z14 1044 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 NKAIN4Q8IVV8 208 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 GJD3Q8N144 294 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 SFXN5Q8TD22 340 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 LRRC3BQ96PB8 259 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 SLC38A1Q9H2H9 487 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 KIAA1549LQ6ZVL6 1849 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 IGKV1-8A0A0C4DH67 115 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 A0A1W2PS29 197 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 SGK494L7N484 410 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 SLC35G4P0C7Q5 338 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 CFL1P23528 166 aaKnown RBP14.65□□□□□ -0.06
NUP88-207ENST00000573584 GPR4P46093 362 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 RAB25P57735 213 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 RRAS2P62070 204 aaPredicted RBP14.65□□□□□ -0.06
NUP88-207ENST00000573584 CSTF1Q05048 431 aaKnown RBP14.65□□□□□ -0.06
NUP88-207ENST00000573584 ACSM1Q08AH1 577 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 ADAM15Q13444 863 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 LYPD8Q6UX82 237 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 FAM20CQ8IXL6 584 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 OR56A1Q8NGH5 318 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 NR4A3Q92570 626 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 SNAPC3Q92966 411 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 OR7D2Q96RA2 312 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 ARHGDIGQ99819 225 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 C11orf49Q9H6J7 331 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 ASB6Q9NWX5 421 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 H2AFY2Q9P0M6 372 aaPredicted RBP14.65□□□□□ -0.06
NUP88-207ENST00000573584 EXOGQ9Y2C4 368 aaKnown RBP14.65□□□□□ -0.06
NUP88-207ENST00000573584 CSNK1G3Q9Y6M4 447 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 SMLR1H3BR10 107 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 ERI3O43414 337 aaKnown RBP14.65□□□□□ -0.06
NUP88-207ENST00000573584 AKR7A2O43488 359 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 PCCBP05166 539 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 ERVFC1P60507 584 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 SNRPD2P62316 118 aaKnown RBP14.65□□□□□ -0.06
NUP88-207ENST00000573584 PRDX1Q06830 199 aaKnown RBP14.65□□□□□ -0.06
NUP88-207ENST00000573584 ELAVL3Q14576 367 aaKnown RBP14.65□□□□□ -0.06
NUP88-207ENST00000573584 TMEM44Q2T9K0 475 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 TMEM52BQ4KMG9 183 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 EOGTQ5NDL2 527 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 VASNQ6EMK4 673 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 B3GLCTQ6Y288 498 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 TMEM91Q6ZNR0 172 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 OR52N1Q8NH53 320 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 FERD3LQ96RJ6 166 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 XKR8Q9H6D3 395 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 TMEM39AQ9NV64 488 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 IL20Q9NYY1 176 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 NTNG1Q9Y2I2 539 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 A0A0G2JMP0 313 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 EDDM13A0A1B0GTR0 161 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 INMT-MINDY4F8WBC2 141 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 SLC19A2O60779 497 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 EFCAB14O75071 495 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 SLC2A10O95528 541 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 IGHA1P01876 353 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 ELK1P19419 428 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 FPR3P25089 353 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 HTR1FP30939 366 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 STAT5AP42229 794 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 PRR5P85299 388 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 BTBD16Q32M84 506 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 TMEM35AQ53FP2 167 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 PRAMEF8Q5VWM4 474 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 PRAMEF7Q5VXH5 474 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 ZNF322Q6U7Q0 402 aaPredicted RBP14.64□□□□□ -0.07
NUP88-207ENST00000573584 NRMQ8IXM6 262 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 ACOT11Q8WXI4 607 aaPredicted RBP14.64□□□□□ -0.07
NUP88-207ENST00000573584 HDHD2Q9H0R4 259 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 GALNT9Q9HCQ5 603 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 PTGFRNQ9P2B2 879 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 TNFRSF10DQ9UBN6 386 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 ENTPD4Q9Y227 616 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.64□□□□□ -0.07
NUP88-207ENST00000573584 CHST2Q9Y4C5 530 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 ASB4Q9Y574 426 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 CDH10Q9Y6N8 788 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 GOLGA4Q13439 2230 aaKnown RBP14.64□□□□□ -0.07
NUP88-207ENST00000573584 DVL2O14641 736 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 OR2B3O76000 313 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 HIST1H1TP22492 207 aaPredicted RBP14.64□□□□□ -0.07
NUP88-207ENST00000573584 IDNKQ5T6J7 187 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 TRILQ7L0X0 811 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 ACOT4Q8N9L9 421 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 SYNDIG1Q9H7V2 258 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 EXTL2Q9UBQ6 330 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 TBX21Q9UL17 535 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 CBLCQ9ULV8 474 aa14.64□□□□□ -0.07
NUP88-207ENST00000573584 TMA7Q9Y2S6 64 aaKnown RBP14.64□□□□□ -0.07
NUP88-207ENST00000573584 A0A0X1KG70 313 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 C4orf51C9J302 202 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 BCL6P41182 706 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 CDK3Q00526 305 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 MAB21L1Q13394 359 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 PGGHGQ32M88 737 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms