RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 DTD2Q96FN9 168 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 THOC3Q96J01 351 aaKnown RBP4.93□□□□□ -1.62
SF3B3-214ENST00000572365 TXNDC15Q96J42 360 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 FER1L6-AS2Q96M78 137 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 AGAP4Q96P64 663 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 PAFAH2Q99487 392 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 GPATCH1Q9BRR8 931 aaKnown RBP4.93□□□□□ -1.62
SF3B3-214ENST00000572365 RIOK2Q9BVS4 552 aaKnown RBP4.93□□□□□ -1.62
SF3B3-214ENST00000572365 XPO4Q9C0E2 1151 aaKnown RBP4.93□□□□□ -1.62
SF3B3-214ENST00000572365 SLC7A5P2Q9GIP4 190 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 GOLPH3LQ9H4A5 285 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 SLC35C2Q9NQQ7 365 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.93□□□□□ -1.62
SF3B3-214ENST00000572365 HIF1ANQ9NWT6 349 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 SOHLH2Q9NX45 425 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 IFNKQ9P0W0 207 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 SPATA7Q9P0W8 599 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 FBXL4Q9UKA2 621 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 PSMD13Q9UNM6 376 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 DYSFO75923 2080 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 EML6Q6ZMW3 1958 aa4.93□□□□□ -1.62
SF3B3-214ENST00000572365 LOC102723996A0A087X1L8 192 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 A0A0U1RQJ8 604 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 TSPAN11A1L157 253 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 SLC9B1P1A6NJY1 282 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 PDZK1P1A8MUH7 402 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 TMEM150CB9EJG8 249 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 F8VZ95 297 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 UBE2CO00762 179 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 SPINT2O43291 252 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 ZNF749O43361 778 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 GAGE7O76087 117 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 ANP32DO95626 131 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 RAB40ALP0C0E4 278 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 GAGE12FP0CL80 117 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 GAGE12GP0CL81 117 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 GAGE12IP0CL82 117 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 IL4RP24394 825 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 DNASE1P24855 282 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 LMO1P25800 156 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 C21orf33P30042 268 aaPredicted RBP4.92□□□□□ -1.62
SF3B3-214ENST00000572365 APOBEC1P41238 236 aaKnown RBP4.92□□□□□ -1.62
SF3B3-214ENST00000572365 SEC61BP60468 96 aaKnown RBP4.92□□□□□ -1.62
SF3B3-214ENST00000572365 ARG2P78540 354 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 BCL2L1Q07817 233 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 KLC1Q07866 573 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 GAGE1Q13065 139 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 GAGE4Q13068 117 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 MAD2L1Q13257 205 aaPredicted RBP4.92□□□□□ -1.62
SF3B3-214ENST00000572365 ITIH4Q14624 930 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 NCF4Q15080 339 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 CTF1Q16619 201 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 PTPN20Q4JDL3 420 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 BRMS1LQ5PSV4 323 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 DCST1Q5T197 706 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 NSUN5P2Q63ZY6 315 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 BRAT1Q6PJG6 821 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 C6orf89Q6UWU4 347 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 C16orf47Q6ZP98 133 aaPredicted RBP4.92□□□□□ -1.62
SF3B3-214ENST00000572365 PRSS42Q7Z5A4 293 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 LRRC49Q8IUZ0 686 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 CCDC71Q8IV32 467 aaPredicted RBP4.92□□□□□ -1.62
SF3B3-214ENST00000572365 CCDC185Q8N715 623 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 CCDC63Q8NA47 563 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 KCTD6Q8NC69 237 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 OR14A16Q8NHC5 309 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 HM13Q8TCT9 377 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 PPP4R1Q8TF05 950 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 DUSP19Q8WTR2 217 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 ZNF473Q8WTR7 871 aaKnown RBP4.92□□□□□ -1.62
SF3B3-214ENST00000572365 PTPMT1Q8WUK0 201 aaPredicted RBP4.92□□□□□ -1.62
SF3B3-214ENST00000572365 TEKT4Q8WW24 435 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 TAAR8Q969N4 342 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 RHBDF1Q96CC6 855 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 ORAI1Q96D31 301 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 TMCO6Q96DC7 493 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 FAM81BQ96LP2 452 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 ZNF48Q96MX3 618 aaPredicted RBP4.92□□□□□ -1.62
SF3B3-214ENST00000572365 OLFM3Q96PB7 478 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 CCT8L2Q96SF2 557 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 TRIM62Q9BVG3 475 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 KLHL4Q9C0H6 718 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 HAUS4Q9H6D7 363 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 ATP13A3Q9H7F0 1226 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 UBE2TQ9NPD8 197 aaPredicted RBP4.92□□□□□ -1.62
SF3B3-214ENST00000572365 QPCTLQ9NXS2 382 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 TRAF3IP3Q9Y228 551 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 MEMO1Q9Y316 297 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 COQ4Q9Y3A0 265 aa4.92□□□□□ -1.62
SF3B3-214ENST00000572365 PHF3Q92576 2039 aaKnown RBP4.92□□□□□ -1.62
SF3B3-214ENST00000572365 SVEP1Q4LDE5 3571 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 hDV102S1A0JD36 115 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 GMNCA6NCL1 334 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 C5orf60A6NFR6 353 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 LILRA5A6NI73 299 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 SOCS6O14544 535 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 TRAFD1O14545 582 aaPredicted RBP4.91□□□□□ -1.62
SF3B3-214ENST00000572365 LSM1O15116 133 aaKnown RBP4.91□□□□□ -1.62
SF3B3-214ENST00000572365 HCRTR1O43613 425 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 PFDN1O60925 122 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms