RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 PRPS2P11908 318 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 CYP4B1P13584 511 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 HOXB9P17482 250 aaPredicted RBP7.92□□□□□ -1.14
SMG6-210ENST00000572205 NTSP30990 170 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 MPIP34949 423 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 ASMTP46597 345 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 RPL14P50914 215 aaKnown RBP7.92□□□□□ -1.14
SMG6-210ENST00000572205 CLDN8P56748 225 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 B3GALT5-AS1P59052 145 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 PLAURQ03405 335 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 CRYZQ08257 329 aaKnown RBP7.92□□□□□ -1.14
SMG6-210ENST00000572205 PLCXD2Q0VAA5 305 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 FUT5Q11128 374 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 ZNF155Q12901 538 aaPredicted RBP7.92□□□□□ -1.14
SMG6-210ENST00000572205 GAB1Q13480 694 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 ATP6AP1LQ52LC2 224 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 MFSD12Q6NUT3 480 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 RGS9BPQ6ZS82 235 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 CD163Q86VB7 1156 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 TAGAPQ8N103 731 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 FADS6Q8N9I5 356 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 FNDC5Q8NAU1 212 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 SLC16A11Q8NCK7 471 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 FAM110BQ8TC76 370 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 MGARPQ8TDB4 240 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 PHF10Q8WUB8 498 aaKnown RBP7.92□□□□□ -1.14
SMG6-210ENST00000572205 PPCDCQ96CD2 204 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 TUBGCP3Q96CW5 907 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 ATP6V1G3Q96LB4 118 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 PPP1R36Q96LQ0 422 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 ZNF597Q96LX8 424 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 BBS4Q96RK4 519 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 G6PC3Q9BUM1 346 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 OSBPL11Q9BXB4 747 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 OR2B2Q9GZK3 357 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 DEFB127Q9H1M4 99 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 VIPAS39Q9H9C1 493 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 ACKR4Q9NPB9 350 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 PNPLA3Q9NST1 481 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 AIG1Q9NVV5 245 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 FBXO34Q9NWN3 711 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 QPCTLQ9NXS2 382 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 PLEKHB1Q9UF11 243 aaPredicted RBP7.92□□□□□ -1.14
SMG6-210ENST00000572205 CFL2Q9Y281 166 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 WIF1Q9Y5W5 379 aa7.92□□□□□ -1.14
SMG6-210ENST00000572205 GPC6Q9Y625 555 aaPredicted RBP7.92□□□□□ -1.14
SMG6-210ENST00000572205 ZNF469Q96JG9 3925 aaPredicted RBP7.92□□□□□ -1.14
SMG6-210ENST00000572205 NOTCH2Q04721 2471 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 IGLV3-32A0A0A0MS00 114 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 A1L4Q6 167 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 PRAMEF25A6NGN4 478 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 NPIPB9F8W1W9 429 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 SUSD5O60279 629 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 COQ9O75208 318 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 BCAS2O75934 225 aaPredicted RBP7.91□□□□□ -1.14
SMG6-210ENST00000572205 IL33O95760 270 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 GP1BBP13224 206 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 CD1EP15812 388 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 COL8A1P27658 744 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 GSTT1P30711 240 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 TMED10P49755 219 aaKnown RBP7.91□□□□□ -1.14
SMG6-210ENST00000572205 PNLIPRP2P54317 469 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 GFRA1P56159 465 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 HBA1P69905 142 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 TFF3Q07654 80 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 STX3Q13277 289 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 SNTA1Q13424 505 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 DUSP5Q16690 384 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.91□□□□□ -1.14
SMG6-210ENST00000572205 SLC9B1Q4ZJI4 515 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 NHSL2Q5HYW2 709 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 TIGD3Q6B0B8 471 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 ARHGAP11AQ6P4F7 1023 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 POMZP3Q6PJE2 187 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 C3P1Q6ZMU1 363 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 NUP54Q7Z3B4 507 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 SLC22A16Q86VW1 577 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 WDR75Q8IWA0 830 aaKnown RBP7.91□□□□□ -1.14
SMG6-210ENST00000572205 CLECL1Q8IZS7 167 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 OR8J2Q8NGG1 315 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 FBXO30Q8TB52 745 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 PIK3R3Q92569 461 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 DIO2Q92813 273 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 TESCQ96BS2 214 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 EFHD2Q96C19 240 aaPredicted RBP7.91□□□□□ -1.14
SMG6-210ENST00000572205 ZNF524Q96C55 264 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 ZBED6CLQ96FA7 236 aaPredicted RBP7.91□□□□□ -1.14
SMG6-210ENST00000572205 OTUB1Q96FW1 271 aaPredicted RBP7.91□□□□□ -1.14
SMG6-210ENST00000572205 C16orf58Q96GQ5 468 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 EAF1Q96JC9 268 aaPredicted RBP7.91□□□□□ -1.14
SMG6-210ENST00000572205 MAGED4Q96JG8 741 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 COL21A1Q96P44 957 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 GNRHR2Q96P88 292 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 MS4A4EQ96PG1 132 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 OR52B2Q96RD2 323 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 ADOQ96SZ5 270 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 TREX2Q9BQ50 279 aaPredicted RBP7.91□□□□□ -1.14
SMG6-210ENST00000572205 DOHHQ9BU89 302 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 RSRP1Q9BUV0 290 aa7.91□□□□□ -1.14
SMG6-210ENST00000572205 WDR55Q9H6Y2 383 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms