RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 DNAJB8Q8NHS0 232 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 GOT1L1Q8NHS2 421 aaPredicted RBP6.39□□□□□ -1.39
SMG6-209ENST00000571442 SFXN5Q8TD22 340 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 GPR151Q8TDV0 419 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 C10orf82Q8WW14 230 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 SLC9A6Q92581 669 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 AURKBQ96GD4 344 aaPredicted RBP6.39□□□□□ -1.39
SMG6-209ENST00000571442 GPR137Q96N19 417 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 RILPQ96NA2 401 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 COL21A1Q96P44 957 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 GNRHR2Q96P88 292 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 OR7D2Q96RA2 312 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 OR52E6Q96RD3 313 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 PRPF18Q99633 342 aaKnown RBP6.39□□□□□ -1.39
SMG6-209ENST00000571442 FAM173AQ9BQD7 235 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 ANGPTL4Q9BY76 406 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 DEFB127Q9H1M4 99 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 ZNF703Q9H7S9 590 aaPredicted RBP6.39□□□□□ -1.39
SMG6-209ENST00000571442 ATAD3AQ9NVI7 634 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 FAM120CQ9NX05 1096 aaKnown RBP6.39□□□□□ -1.39
SMG6-209ENST00000571442 TNFRSF10DQ9UBN6 386 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 BTNL2Q9UIR0 455 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 CBLCQ9ULV8 474 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.39□□□□□ -1.39
SMG6-209ENST00000571442 A0A1B0GTH9 108 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 FAM234BA2RU67 622 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 CLEC18AA5D8T8 446 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 ANKRD33BA6NCL7 494 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 ANKUB1A6NFN9 424 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 PRAMEF25A6NGN4 478 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 CCDC154A6NI56 674 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 KLRC4-KLRK1H3BQV0 150 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 NR5A2O00482 541 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 SNPHO15079 494 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 OIP5O43482 229 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 ASNA1O43681 348 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 SCO2O43819 266 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 FADS1O60427 444 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 SEMA7AO75326 666 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 UTS2O95399 124 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 IL33O95760 270 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 CRYABP02511 175 aaKnown RBP6.38□□□□□ -1.39
SMG6-209ENST00000571442 VIMP08670 466 aaKnown RBP6.38□□□□□ -1.39
SMG6-209ENST00000571442 EDN3P14138 238 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 ZNF24P17028 368 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 MATN1P21941 496 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 EVI2BP34910 448 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 POLR2JP52435 117 aaKnown RBP6.38□□□□□ -1.39
SMG6-209ENST00000571442 PNLIPRP2P54317 469 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 PPIAP62937 165 aaKnown RBP6.38□□□□□ -1.39
SMG6-209ENST00000571442 KCNJ2P63252 427 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 PLGLB1Q02325 96 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 UBAP2LQ14157 1087 aaKnown RBP6.38□□□□□ -1.39
SMG6-209ENST00000571442 RCAN2Q14206 197 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 SQLEQ14534 574 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 HYAL4Q2M3T9 481 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 DPY19L1Q2PZI1 675 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 SPDYE7PQ495Y7 208 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 VPS26BQ4G0F5 336 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 CYP27C1Q4G0S4 372 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 AGKQ53H12 422 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.38□□□□□ -1.39
SMG6-209ENST00000571442 ANXA8L1Q5VT79 327 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 OR5M10Q6IEU7 315 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 TNFAIP8L2Q6P589 184 aaPredicted RBP6.38□□□□□ -1.39
SMG6-209ENST00000571442 TMEM81Q6P7N7 255 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 BLOC1S3Q6QNY0 202 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 CLEC18BQ6UXF7 455 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 ANGPTL8Q6UXH0 198 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 NUP54Q7Z3B4 507 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 HMGN2P46Q86SG4 172 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 MARCH3Q86UD3 253 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 RETREG3Q86VR2 466 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 DND1Q8IYX4 353 aaKnown RBP6.38□□□□□ -1.39
SMG6-209ENST00000571442 MIER2Q8N344 545 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 NATD1Q8N6N6 113 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 GATSQ8NAP1 163 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 POGLUT1Q8NBL1 392 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 CLEC18CQ8NCF0 446 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 OR56A1Q8NGH5 318 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 OR4C3Q8NH37 302 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 PNPT1Q8TCS8 783 aaKnown RBP6.38□□□□□ -1.39
SMG6-209ENST00000571442 ZFP90Q8TF47 636 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 STON2Q8WXE9 905 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 JADE3Q92613 823 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 GTF2H4Q92759 462 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 RAB8BQ92930 207 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 ZNF524Q96C55 264 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 ARSGQ96EG1 525 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 TMEM41AQ96HV5 264 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 SLC35G5Q96KT7 338 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 JSRP1Q96MG2 331 aaPredicted RBP6.38□□□□□ -1.39
SMG6-209ENST00000571442 NPAS1Q99742 590 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 SLC35A5Q9BS91 424 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 DOHHQ9BU89 302 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 OSBPL11Q9BXB4 747 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 ACTRT3Q9BYD9 372 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 PAIP1Q9H074 479 aaKnown RBP6.38□□□□□ -1.39
SMG6-209ENST00000571442 SLC6A15Q9H2J7 730 aa6.38□□□□□ -1.39
SMG6-209ENST00000571442 OR51I1Q9H343 314 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms