RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 FAM124BQ9H5Z6 455 aaPredicted RBP4.14□□□□□ -1.75
CHD9-220ENST00000569794 MCCC2Q9HCC0 563 aa4.14□□□□□ -1.75
CHD9-220ENST00000569794 SLC52A3Q9NQ40 469 aa4.14□□□□□ -1.75
CHD9-220ENST00000569794 POLE4Q9NR33 117 aa4.14□□□□□ -1.75
CHD9-220ENST00000569794 C1orf123Q9NWV4 160 aa4.14□□□□□ -1.75
CHD9-220ENST00000569794 AHSPQ9NZD4 102 aa4.14□□□□□ -1.75
CHD9-220ENST00000569794 PILRAQ9UKJ1 303 aa4.14□□□□□ -1.75
CHD9-220ENST00000569794 RPH3ALQ9UNE2 315 aa4.14□□□□□ -1.75
CHD9-220ENST00000569794 DIMT1Q9UNQ2 313 aaKnown RBP4.14□□□□□ -1.75
CHD9-220ENST00000569794 TRAV25A0A0B4J276 109 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 GOLGA6L9A6NEM1 432 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 YJEFN3A6XGL0 299 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 GABRR3A8MPY1 467 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 A8MU76 341 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 HHLA1C9JL84 531 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 E9PMD0 336 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 SGK494L7N484 410 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 NDUFA7O95182 113 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 TSPAN12O95859 305 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 LYNP07948 512 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 MYOD1P15172 320 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 LAP3P28838 519 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 HTR2BP41595 481 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 ALDH3B1P43353 468 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 NAMPTP43490 491 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 CCT3P49368 545 aaKnown RBP4.13□□□□□ -1.75
CHD9-220ENST00000569794 MAZP56270 477 aaKnown RBP4.13□□□□□ -1.75
CHD9-220ENST00000569794 CLDN17P56750 224 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 RPS18P62269 152 aaKnown RBP4.13□□□□□ -1.75
CHD9-220ENST00000569794 PPIAP62937 165 aaKnown RBP4.13□□□□□ -1.75
CHD9-220ENST00000569794 SRYQ05066 204 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 TRAP1Q12931 704 aaKnown RBP4.13□□□□□ -1.75
CHD9-220ENST00000569794 STK38Q15208 465 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 PARP6Q2NL67 630 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 HSP90AA4PQ58FG1 418 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 SIRPB2Q5JXA9 342 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 OR2A2Q6IF42 318 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 C6orf89Q6UWU4 347 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 TMEM64Q6YI46 380 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 SCARA5Q6ZMJ2 495 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 C17orf107Q6ZR85 190 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 Q75L30 129 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 GPBP1Q86WP2 473 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 APLFQ8IW19 511 aaPredicted RBP4.13□□□□□ -1.75
CHD9-220ENST00000569794 MICU2Q8IYU8 434 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 TMEM99Q8N816 258 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 FAM83FQ8NEG4 500 aaPredicted RBP4.13□□□□□ -1.75
CHD9-220ENST00000569794 OR4K14Q8NGD5 310 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 OR4C15Q8NGM1 316 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 GPX8Q8TED1 209 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 PDCD6IPQ8WUM4 868 aaKnown RBP4.13□□□□□ -1.75
CHD9-220ENST00000569794 TMEM190Q8WZ59 177 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 ST8SIA1Q92185 356 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 ZNF689Q96CS4 500 aaPredicted RBP4.13□□□□□ -1.75
CHD9-220ENST00000569794 BPIFA2Q96DR5 249 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 ZNF274Q96GC6 653 aaPredicted RBP4.13□□□□□ -1.75
CHD9-220ENST00000569794 C8orf76Q96K31 380 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 ART5Q96L15 291 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 ZNF354BQ96LW1 612 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 SGK494Q96LW2 274 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 S1PR3Q99500 378 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 KCNS3Q9BQ31 491 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 NUSAP1Q9BXS6 441 aaKnown RBP4.13□□□□□ -1.75
CHD9-220ENST00000569794 NLNQ9BYT8 704 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 ZNF665Q9H7R5 613 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 TLE6Q9H808 572 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 RNF186Q9NXI6 227 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 PTTG3PQ9NZH4 202 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 PIPOXQ9P0Z9 390 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 MIOXQ9UGB7 285 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 PITPNC1Q9UKF7 332 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 ADAM28Q9UKQ2 775 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 RNF115Q9Y4L5 304 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 OR1A2Q9Y585 309 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 PTPRCP08575 1304 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 IL16Q14005 1332 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 CARMIL1Q5VZK9 1371 aa4.13□□□□□ -1.75
CHD9-220ENST00000569794 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.12□□□□□ -1.75
CHD9-220ENST00000569794 PPIAL4CA0A0B4J2A2 164 aa4.12□□□□□ -1.75
CHD9-220ENST00000569794 A0A1W2PRB8 838 aa4.12□□□□□ -1.75
CHD9-220ENST00000569794 OR5K3A6NET4 321 aa4.12□□□□□ -1.75
CHD9-220ENST00000569794 LRRC30A6NM36 301 aa4.12□□□□□ -1.75
CHD9-220ENST00000569794 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.12□□□□□ -1.75
CHD9-220ENST00000569794 ZNF732B4DXR9 585 aa4.12□□□□□ -1.75
CHD9-220ENST00000569794 TEX46H3BTG2 121 aa4.12□□□□□ -1.75
CHD9-220ENST00000569794 POLR1CO15160 346 aaPredicted RBP4.12□□□□□ -1.75
CHD9-220ENST00000569794 BUD23O43709 281 aaKnown RBP4.12□□□□□ -1.75
CHD9-220ENST00000569794 DUX1O43812 170 aa4.12□□□□□ -1.75
CHD9-220ENST00000569794 WDR1O75083 606 aa4.12□□□□□ -1.75
CHD9-220ENST00000569794 PRKRAO75569 313 aaKnown RBP4.12□□□□□ -1.75
CHD9-220ENST00000569794 EML2O95834 649 aa4.12□□□□□ -1.75
CHD9-220ENST00000569794 PGK1P00558 417 aa4.12□□□□□ -1.75
CHD9-220ENST00000569794 CALCAP01258 141 aa4.12□□□□□ -1.75
CHD9-220ENST00000569794 PPIAL4GP0DN37 164 aa4.12□□□□□ -1.75
CHD9-220ENST00000569794 HNRNPH3P31942 346 aaKnown RBP4.12□□□□□ -1.75
CHD9-220ENST00000569794 CASP14P31944 242 aa4.12□□□□□ -1.75
CHD9-220ENST00000569794 HTR5AP47898 357 aa4.12□□□□□ -1.75
CHD9-220ENST00000569794 CCR4P51679 360 aa4.12□□□□□ -1.75
CHD9-220ENST00000569794 CDH6P55285 790 aa4.12□□□□□ -1.75
CHD9-220ENST00000569794 OSTNP61366 133 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms