RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 MEMO1Q9Y316 297 aa13.3□□□□□ -0.28
COMMD4-225ENST00000569245 PRSS51A0A1B0GVH4 220 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 RNASET2O00584 256 aaKnown RBP13.29□□□□□ -0.28
COMMD4-225ENST00000569245 AIM2O14862 343 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 CPOXP36551 454 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 FRKP42685 505 aaPredicted RBP13.29□□□□□ -0.28
COMMD4-225ENST00000569245 SMSP52788 366 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 NCALDP61601 193 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 RPP38P78345 283 aaKnown RBP13.29□□□□□ -0.28
COMMD4-225ENST00000569245 FOXO1Q12778 655 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 ART3Q13508 389 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 SLC10A1Q14973 349 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 CEBPEQ15744 281 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 NTRK2Q16620 822 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 PAGE3Q5JUK9 113 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 SLC2A7Q6PXP3 512 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 RINLQ6ZS11 566 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 FGD2Q7Z6J4 655 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 CHERPQ8IWX8 916 aaKnown RBP13.29□□□□□ -0.28
COMMD4-225ENST00000569245 FAM109AQ8N4B1 249 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 RBM15BQ8NDT2 890 aaKnown RBP13.29□□□□□ -0.28
COMMD4-225ENST00000569245 C17orf47Q8NEP4 570 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 FAM57AQ8TBR7 257 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 GTF2H4Q92759 462 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 ITCHQ96J02 903 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 LCORQ96JN0 433 aaPredicted RBP13.29□□□□□ -0.28
COMMD4-225ENST00000569245 CCDC115Q96NT0 180 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 ITPAQ9BY32 194 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 NXF5Q9H1B4 397 aaKnown RBP13.29□□□□□ -0.28
COMMD4-225ENST00000569245 EXO5Q9H790 373 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 ZFP64Q9NPA5 681 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 SERHLQ9NQF3 203 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 NDE1Q9NXR1 346 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 TAS2R1Q9NYW7 299 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 ZNF639Q9UID6 485 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 DTX4Q9Y2E6 619 aa13.29□□□□□ -0.28
COMMD4-225ENST00000569245 CHCHD2Q9Y6H1 151 aaPredicted RBP13.29□□□□□ -0.28
COMMD4-225ENST00000569245 PRSS44E7EML9 344 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 NPIPA2E9PIF3 369 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 NPIPA3F8WFD2 350 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 BCAS2O75934 225 aaPredicted RBP13.28□□□□□ -0.28
COMMD4-225ENST00000569245 CBX7O95931 251 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 KRT16P08779 473 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 ABCD3P28288 659 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 TRPC1P48995 793 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 NUDT2P50583 147 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 NCBP2P52298 156 aaKnown RBP eCLIP13.28□□□□□ -0.28
COMMD4-225ENST00000569245 DCAF7P61962 342 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 DUSP8Q13202 625 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 MLC1Q15049 377 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 ZNF628Q5EBL2 1059 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 TBCELQ5QJ74 424 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 LRIF1Q5T3J3 769 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 C8orf82Q6P1X6 216 aaPredicted RBP13.28□□□□□ -0.28
COMMD4-225ENST00000569245 ASRGL1Q7L266 308 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 CD163Q86VB7 1156 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 ZNF808Q8N4W9 903 aaPredicted RBP13.28□□□□□ -0.28
COMMD4-225ENST00000569245 SIMC1Q8NDZ2 872 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 FBXO27Q8NI29 283 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 ITLN2Q8WWU7 325 aaPredicted RBP13.28□□□□□ -0.28
COMMD4-225ENST00000569245 CTHRC1Q96CG8 243 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 PHF12Q96QT6 1004 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 BTBD10Q9BSF8 475 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 LRMDAQ9H2I8 198 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 ZDHHC11Q9H8X9 412 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 ANKRA2Q9H9E1 313 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 ACSS1Q9NUB1 689 aaPredicted RBP13.28□□□□□ -0.28
COMMD4-225ENST00000569245 GID8Q9NWU2 228 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 B4GALT7Q9UBV7 327 aa13.28□□□□□ -0.28
COMMD4-225ENST00000569245 CNOT11Q9UKZ1 510 aaKnown RBP13.28□□□□□ -0.28
COMMD4-225ENST00000569245 DIDO1Q9BTC0 2240 aaKnown RBP13.27□□□□□ -0.28
COMMD4-225ENST00000569245 A0A096LPI6 279 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 MYO1GB0I1T2 1018 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 E9PLN8 166 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 ACOX3O15254 700 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 PDPK1O15530 556 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 ERN1O75460 977 aaKnown RBP13.27□□□□□ -0.29
COMMD4-225ENST00000569245 KCNH1O95259 989 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 CELA3AP09093 270 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 DRD5P21918 477 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 NTSP30990 170 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 PPICP45877 212 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 MASP1P48740 699 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 EMDP50402 254 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 MXRA7P84157 204 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 PLCXD2Q0VAA5 305 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 NFYCQ13952 458 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 HYAL4Q2M3T9 481 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 TRMT5Q32P41 509 aaKnown RBP13.27□□□□□ -0.29
COMMD4-225ENST00000569245 DNAL1Q4LDG9 190 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 BICRALQ6AI39 1079 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 XKRXQ6PP77 449 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 C16orf89Q6UX73 402 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 DLEU7Q6UYE1 221 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 DHDDSQ86SQ9 333 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 PACS2Q86VP3 889 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 PGAM4Q8N0Y7 254 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 GOT1L1Q8NHS2 421 aaPredicted RBP13.27□□□□□ -0.29
COMMD4-225ENST00000569245 SPPL2AQ8TCT8 520 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 ZNF675Q8TD23 568 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms