RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 TBXA2RP21731 343 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 IL12BP29460 328 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 RFX3P48380 749 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 PLTPP55058 493 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 CDH13P55290 713 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 SLC7A5Q01650 507 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 GUSBP1Q15486 140 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 CLEC12BQ2HXU8 276 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 LETMD1Q6P1Q0 360 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 GALNT10Q86SR1 603 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 FADS6Q8N9I5 356 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 OR7G2Q8NG99 324 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 LILRB1Q8NHL6 650 aaPredicted RBP13.33□□□□□ -0.28
USB1-214ENST00000568848 RNF138Q8WVD3 245 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 AKAP1Q92667 903 aaKnown RBP eCLIP13.33□□□□□ -0.28
USB1-214ENST00000568848 VSTM2LQ96N03 204 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 BTBD9Q96Q07 612 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 YAE1D1Q9NRH1 226 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 ZNF701Q9NV72 531 aaPredicted RBP13.33□□□□□ -0.28
USB1-214ENST00000568848 PCTPQ9UKL6 214 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 UTS2RQ9UKP6 389 aa13.33□□□□□ -0.28
USB1-214ENST00000568848 UTP11Q9Y3A2 253 aaKnown RBP13.33□□□□□ -0.28
USB1-214ENST00000568848 C1orf226A1L170 272 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 SYCE1LA8MT33 242 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 EMC8O43402 210 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 UGDHO60701 494 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 ESRRBO95718 433 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 ALDOAP04075 364 aaKnown RBP13.32□□□□□ -0.28
USB1-214ENST00000568848 PEPDP12955 493 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 EVI2BP34910 448 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 ACVR1BP36896 505 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 ZNF155Q12901 538 aaPredicted RBP13.32□□□□□ -0.28
USB1-214ENST00000568848 OR2A2Q6IF42 318 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 ZDHHC24Q6UX98 284 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 STAC2Q6ZMT1 411 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 ZNF572Q7Z3I7 529 aaPredicted RBP13.32□□□□□ -0.28
USB1-214ENST00000568848 MARCH3Q86UD3 253 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 MEIOBQ8N635 442 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 RHEBL1Q8TAI7 183 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 FBXO25Q8TCJ0 367 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 C16orf45Q96MC5 204 aaPredicted RBP13.32□□□□□ -0.28
USB1-214ENST00000568848 SLC39A3Q9BRY0 314 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 EBPLQ9BY08 206 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 ELOVL5Q9NYP7 299 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 ZNF225Q9UK10 706 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 CFL2Q9Y281 166 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 FREM1Q5H8C1 2179 aa13.32□□□□□ -0.28
USB1-214ENST00000568848 HS3ST1O14792 307 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 EIF3HO15372 352 aaKnown RBP eCLIP13.31□□□□□ -0.28
USB1-214ENST00000568848 GPRIN2O60269 458 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 KLHL2O95198 593 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 CRHP06850 196 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 CD8BP10966 210 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 MAGEA4P43358 317 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 HTR6P50406 440 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 DSCR4P56555 118 aaPredicted RBP13.31□□□□□ -0.28
USB1-214ENST00000568848 RAE1P78406 368 aaKnown RBP13.31□□□□□ -0.28
USB1-214ENST00000568848 FAPQ12884 760 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 IFT88Q13099 833 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 FAM83EQ2M2I3 478 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 BEX5Q5H9J7 111 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 GGNQ86UU5 652 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 DUSP19Q8WTR2 217 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 SELENOMQ8WWX9 145 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 ACTR6Q9GZN1 396 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 ELOVL6Q9H5J4 265 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 C12orf49Q9H741 205 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 TMEM185BQ9H7F4 350 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 XPR1Q9UBH6 696 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 PRODH2Q9UF12 536 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 GDF2Q9UK05 429 aaPredicted RBP13.31□□□□□ -0.28
USB1-214ENST00000568848 ADAM29Q9UKF5 820 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 ZNF780BQ9Y6R6 833 aa13.31□□□□□ -0.28
USB1-214ENST00000568848 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.31□□□□□ -0.285e-11■■□□□ 11.9
USB1-214ENST00000568848 ESYT3A0FGR9 886 aa13.3□□□□□ -0.28
USB1-214ENST00000568848 EIF1AYO14602 144 aaKnown RBP13.3□□□□□ -0.28
USB1-214ENST00000568848 CLOCKO15516 846 aa13.3□□□□□ -0.28
USB1-214ENST00000568848 ADAM11O75078 769 aa13.3□□□□□ -0.28
USB1-214ENST00000568848 URI1O94763 535 aaPredicted RBP13.3□□□□□ -0.28
USB1-214ENST00000568848 OR4F21O95013 312 aa13.3□□□□□ -0.28
USB1-214ENST00000568848 EIF1AXP47813 144 aaKnown RBP13.3□□□□□ -0.28
USB1-214ENST00000568848 RNF144AP50876 292 aaPredicted RBP13.3□□□□□ -0.28
USB1-214ENST00000568848 ACAP2Q15057 778 aa13.3□□□□□ -0.28
USB1-214ENST00000568848 BCL2A1Q16548 175 aa13.3□□□□□ -0.28
USB1-214ENST00000568848 SCIMPQ6UWF3 145 aa13.3□□□□□ -0.28
USB1-214ENST00000568848 APOOLQ6UXV4 268 aa13.3□□□□□ -0.28
USB1-214ENST00000568848 SH2D5Q6ZV89 423 aa13.3□□□□□ -0.28
USB1-214ENST00000568848 PAGE2Q7Z2X7 111 aa13.3□□□□□ -0.28
USB1-214ENST00000568848 MILR1Q7Z6M3 343 aa13.3□□□□□ -0.28
USB1-214ENST00000568848 GATSQ8NAP1 163 aa13.3□□□□□ -0.28
USB1-214ENST00000568848 CDC26Q8NHZ8 85 aa13.3□□□□□ -0.28
USB1-214ENST00000568848 UHMK1Q8TAS1 419 aaKnown RBP13.3□□□□□ -0.28
USB1-214ENST00000568848 SLC9A6Q92581 669 aa13.3□□□□□ -0.28
USB1-214ENST00000568848 LRRC1Q9BTT6 524 aa13.3□□□□□ -0.28
USB1-214ENST00000568848 REG4Q9BYZ8 158 aa13.3□□□□□ -0.28
USB1-214ENST00000568848 RAB17Q9H0T7 212 aa13.3□□□□□ -0.28
USB1-214ENST00000568848 PSD3Q9NYI0 1048 aa13.3□□□□□ -0.28
USB1-214ENST00000568848 VDAC3Q9Y277 283 aa13.3□□□□□ -0.28
USB1-214ENST00000568848 OR10H1Q9Y4A9 318 aa13.3□□□□□ -0.28
USB1-214ENST00000568848 MAGED1Q9Y5V3 778 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms