RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 TSPAN31Q12999 210 aa9.15□□□□□ -0.95
SMG1-205ENST00000561947 ELOCQ15369 112 aa9.15□□□□□ -0.95
SMG1-205ENST00000561947 GPR68Q15743 365 aa9.15□□□□□ -0.95
SMG1-205ENST00000561947 DECR1Q16698 335 aa9.15□□□□□ -0.95
SMG1-205ENST00000561947 EIPR1Q53HC9 387 aa9.15□□□□□ -0.95
SMG1-205ENST00000561947 SLC25A30Q5SVS4 291 aa9.15□□□□□ -0.95
SMG1-205ENST00000561947 DCST2Q5T1A1 773 aa9.15□□□□□ -0.95
SMG1-205ENST00000561947 ACSM5Q6NUN0 579 aa9.15□□□□□ -0.95
SMG1-205ENST00000561947 ADCK1Q86TW2 530 aa9.15□□□□□ -0.95
SMG1-205ENST00000561947 MCATQ8IVS2 390 aaKnown RBP9.15□□□□□ -0.95
SMG1-205ENST00000561947 FAM26EQ8N5C1 309 aa9.15□□□□□ -0.95
SMG1-205ENST00000561947 DEFB119Q8N690 84 aa9.15□□□□□ -0.95
SMG1-205ENST00000561947 AVL9Q8NBF6 648 aa9.15□□□□□ -0.95
SMG1-205ENST00000561947 OR9A4Q8NGU2 314 aa9.15□□□□□ -0.95
SMG1-205ENST00000561947 WDR36Q8NI36 951 aaKnown RBP9.15□□□□□ -0.95
SMG1-205ENST00000561947 PIGXQ8TBF5 258 aa9.15□□□□□ -0.95
SMG1-205ENST00000561947 ZHX1-C8orf76Q96EF9 292 aa9.15□□□□□ -0.95
SMG1-205ENST00000561947 OSGIN1Q9UJX0 560 aa9.15□□□□□ -0.95
SMG1-205ENST00000561947 CORINQ9Y5Q5 1042 aa9.15□□□□□ -0.95
SMG1-205ENST00000561947 PMF1-BGLAPU3KQ54 211 aa9.15□□□□□ -0.95
SMG1-205ENST00000561947 CENPVL1A0A0U1RR11 272 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 SLC9B1P1A6NJY1 282 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 METTL12A8MUP2 240 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 J3QRK9 145 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 STX11O75558 287 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 RPLP0P05388 317 aaKnown RBP9.14□□□□□ -0.95
SMG1-205ENST00000561947 DBTP11182 482 aaKnown RBP9.14□□□□□ -0.95
SMG1-205ENST00000561947 OMPP47874 163 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 FASLGP48023 281 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 RGS6P49758 472 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 ZNF91Q05481 1191 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 EXOSC7Q15024 291 aaKnown RBP9.14□□□□□ -0.95
SMG1-205ENST00000561947 NCF4Q15080 339 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 PRTGQ2VWP7 1150 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 GDF7Q7Z4P5 450 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 MEX3DQ86XN8 651 aaKnown RBP9.14□□□□□ -0.95
SMG1-205ENST00000561947 NKAIN4Q8IVV8 208 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 ARL14Q8N4G2 192 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 COX18Q8N8Q8 333 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 TEX47Q8TBZ9 253 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 ACOT11Q8WXI4 607 aaPredicted RBP9.14□□□□□ -0.95
SMG1-205ENST00000561947 PIK3R3Q92569 461 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 CTHRC1Q96CG8 243 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 SLC41A3Q96GZ6 507 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 TMEM80Q96HE8 168 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 OR5M11Q96RB7 305 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 TSSK6Q9BXA6 273 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 PLA2G12AQ9BZM1 189 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 SAP130Q9H0E3 1048 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 DCSTAMPQ9H295 470 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 CHRDQ9H2X0 955 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 EGLN3Q9H6Z9 239 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 THADAQ6YHU6 1953 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 TMEM265A0A087WTH1 108 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 CLDN25C9JDP6 229 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 CHST10O43529 356 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 TLX2O43763 284 aaPredicted RBP9.14□□□□□ -0.95
SMG1-205ENST00000561947 NTN1O95631 604 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 AK1P00568 194 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 THY1P04216 161 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 DBIP07108 87 aaKnown RBP9.14□□□□□ -0.95
SMG1-205ENST00000561947 CD38P28907 300 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 CSTF2P33240 577 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMG1-205ENST00000561947 GRK5P34947 590 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 MAP3K8P41279 467 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 EFNB1P98172 346 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 FZD5Q13467 585 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 ZNF846Q147U1 533 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 MED22Q15528 200 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 C16orf87Q6PH81 154 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 CHRDL2Q6WN34 429 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 RASSF6Q6ZTQ3 369 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 RRM2BQ7LG56 351 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 BCDIN3DQ7Z5W3 292 aaKnown RBP9.14□□□□□ -0.95
SMG1-205ENST00000561947 MRGPREQ86SM8 312 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 GKN2Q86XP6 184 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 LMX1AQ8TE12 382 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 FGF11Q92914 225 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 FAM46AQ96IP4 442 aaKnown RBP9.14□□□□□ -0.95
SMG1-205ENST00000561947 UCK1Q9HA47 277 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 AKIP1Q9NQ31 210 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 CNIH4Q9P003 139 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 PCDHGA3Q9Y5H0 932 aa9.14□□□□□ -0.95
SMG1-205ENST00000561947 KIAA0513O60268 411 aa9.13□□□□□ -0.95
SMG1-205ENST00000561947 PROS1P07225 676 aa9.13□□□□□ -0.95
SMG1-205ENST00000561947 SLC35E2P0CK97 266 aa9.13□□□□□ -0.95
SMG1-205ENST00000561947 HSMCR30P0CW71 290 aa9.13□□□□□ -0.95
SMG1-205ENST00000561947 CAPZBP47756 277 aa9.13□□□□□ -0.95
SMG1-205ENST00000561947 ZNF136P52737 540 aa9.13□□□□□ -0.95
SMG1-205ENST00000561947 TUBA1BP68363 451 aa9.13□□□□□ -0.95
SMG1-205ENST00000561947 RHAGQ02094 409 aa9.13□□□□□ -0.95
SMG1-205ENST00000561947 UBXN2BQ14CS0 331 aa9.13□□□□□ -0.95
SMG1-205ENST00000561947 SMAD2Q15796 467 aaKnown RBP9.13□□□□□ -0.95
SMG1-205ENST00000561947 MAPK14Q16539 360 aa9.13□□□□□ -0.95
SMG1-205ENST00000561947 SYT14P1Q58G82 188 aa9.13□□□□□ -0.95
SMG1-205ENST00000561947 RNLSQ5VYX0 342 aa9.13□□□□□ -0.95
SMG1-205ENST00000561947 USP43Q70EL4 1123 aa9.13□□□□□ -0.95
SMG1-205ENST00000561947 TUBA1AQ71U36 451 aa9.13□□□□□ -0.95
SMG1-205ENST00000561947 TOR1AIP2Q8NFQ8 470 aa9.13□□□□□ -0.95
SMG1-205ENST00000561947 OR8D4Q8NGM9 314 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms