RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 METTL2BQ6P1Q9 378 aaKnown RBP13.24□□□□□ -0.29
SPG11-210ENST00000558319 TECPR1Q7Z6L1 1165 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 OR5H6Q8NGV6 325 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 CPEB1Q9BZB8 566 aaKnown RBP13.24□□□□□ -0.29
SPG11-210ENST00000558319 CDC14CA4D256 554 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 SOBPA7XYQ1 873 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 FAM155AB1AL88 458 aaPredicted RBP13.24□□□□□ -0.29
SPG11-210ENST00000558319 H0Y8G0 127 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 EEDO75530 441 aaKnown RBP13.24□□□□□ -0.29
SPG11-210ENST00000558319 PIGRP01833 764 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 ETFAP13804 333 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 ACPPP15309 386 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 CASP6P55212 293 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 KIAA1211LQ6NV74 962 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 ACBD7Q8N6N7 88 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 MICU1Q9BPX6 476 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 ATG4BQ9Y4P1 393 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 HSPB6O14558 160 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 ZNF84P51523 738 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 CDK3Q00526 305 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 TLE3Q04726 772 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 DBPQ10586 325 aaPredicted RBP13.24□□□□□ -0.29
SPG11-210ENST00000558319 MBTPS1Q14703 1052 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 METTL11BQ5VVY1 283 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 PSAPL1Q6NUJ1 521 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 DPY19L2P1Q6NXN4 242 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 PAPD4Q6PIY7 484 aaKnown RBP13.24□□□□□ -0.29
SPG11-210ENST00000558319 LIPIQ6XZB0 460 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 NRROSQ86YC3 692 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 DCUN1D3Q8IWE4 304 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 ZNF808Q8N4W9 903 aaPredicted RBP13.24□□□□□ -0.29
SPG11-210ENST00000558319 CSNK1A1LQ8N752 337 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 GDPD1Q8N9F7 314 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 OR4Q3Q8NH05 313 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 FBXO27Q8NI29 283 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 C16orf78Q8WTQ4 265 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 FUBP3Q96I24 572 aaKnown RBP eCLIP13.24□□□□□ -0.29
SPG11-210ENST00000558319 BOCQ9BWV1 1114 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 QPCTLQ9NXS2 382 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 VSX1Q9NZR4 365 aaPredicted RBP13.24□□□□□ -0.29
SPG11-210ENST00000558319 NUBP2Q9Y5Y2 271 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 KDELR2P33947 212 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 CD79BP40259 229 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 POLR2HP52434 150 aaKnown RBP13.24□□□□□ -0.29
SPG11-210ENST00000558319 ACTA2P62736 377 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 ACTG2P63267 376 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 ZNF805Q5CZA5 627 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 ZNF585AQ6P3V2 769 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 NETO1Q8TDF5 533 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 BORCS7Q96B45 105 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 RRNAD1Q96FB5 475 aaKnown RBP13.24□□□□□ -0.29
SPG11-210ENST00000558319 TSGA13Q96PP4 275 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 PAPOLGQ9BWT3 736 aaKnown RBP13.24□□□□□ -0.29
SPG11-210ENST00000558319 SMOC2Q9H3U7 446 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 ANHXE9PGG2 379 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 OR7A17O14581 309 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 RAB28P51157 221 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 GPR155Q7Z3F1 870 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 ZNF695Q8IW36 515 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 CLECL1Q8IZS7 167 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 OR51T1Q8NGJ9 327 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 NRG4Q8WWG1 115 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 RLN3Q8WXF3 142 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 GPR88Q9GZN0 384 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 SLC2A4RGQ9NR83 387 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 PLEKHM1Q9Y4G2 1056 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 HRGP04196 525 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 UGT2B7P16662 529 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 RHCEP18577 417 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 RBMS1P29558 406 aaKnown RBP13.23□□□□□ -0.29
SPG11-210ENST00000558319 TDGQ13569 410 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 UNC50Q53HI1 259 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 PRSS48Q7RTY5 328 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 OR52P1PQ8NH57 321 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 SLC35F5Q8WV83 523 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 SIGLEC10Q96LC7 697 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 ZNF681Q96N22 645 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 THAP7Q9BT49 309 aaPredicted RBP13.23□□□□□ -0.29
SPG11-210ENST00000558319 ASB3Q9Y575 518 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 SNAI1O95863 264 aaPredicted RBP13.23□□□□□ -0.29
SPG11-210ENST00000558319 BDH1Q02338 343 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 DLX2Q07687 328 aaPredicted RBP13.23□□□□□ -0.29
SPG11-210ENST00000558319 NLRP8Q86W28 1048 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 FAM109AQ8N4B1 249 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 DNAJC5GQ8N7S2 189 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 OR5AK2Q8NH90 309 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 MAP3K3Q99759 626 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 NLE1Q9NVX2 485 aaPredicted RBP13.23□□□□□ -0.29
SPG11-210ENST00000558319 RPH3ALQ9UNE2 315 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 NCR1O76036 304 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 ARSAP15289 507 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 CHRNEQ04844 493 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 SCAPQ12770 1279 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 SERINC3Q13530 473 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 MLC1Q15049 377 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 TP53I3Q53FA7 332 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 ALKAL2Q6UX46 152 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 OR8J1Q8NGP2 316 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 LILRB4Q8NHJ6 448 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 RHBDD1Q8TEB9 315 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms