RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 RAB40BQ12829 278 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 CDNFQ49AH0 187 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 KRBOX4Q5JUW0 171 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 AFMIDQ63HM1 303 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 ZNF783Q6ZMS7 281 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 C3P1Q6ZMU1 363 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 TMPRSS12Q86WS5 348 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 TMC8Q8IU68 726 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 RBM45Q8IUH3 476 aaKnown RBP4.71□□□□□ -1.66
SYNE2-223ENST00000557005 SIAH3Q8IW03 269 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 JAGN1Q8N5M9 183 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 ZNF527Q8NB42 609 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 ZSCAN1Q8NBB4 408 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 SDR9C7Q8NEX9 313 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 OR4K5Q8NGD3 323 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 OR4K13Q8NH42 304 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 OR14C36Q8NHC7 312 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 SMPDL3AQ92484 453 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 OPALINQ96PE5 141 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 ATF6BQ99941 703 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 PRR14Q9BWN1 585 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 CACNG6Q9BXT2 260 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 ACTR6Q9GZN1 396 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 EMC7Q9NPA0 242 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 NDUFAF4Q9P032 175 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 KLHL9Q9P2J3 617 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 HCSTQ9UBK5 93 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 KCNK6Q9Y257 313 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 ZNF443Q9Y2A4 671 aaPredicted RBP4.71□□□□□ -1.66
SYNE2-223ENST00000557005 NRXN2Q9P2S2 1712 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 METTL21EPA6NDL7 271 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 TNFRSF10BO14763 440 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 LATO43561 262 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 CREBL2O60519 120 aaPredicted RBP4.71□□□□□ -1.66
SYNE2-223ENST00000557005 TRIM3O75382 744 aaPredicted RBP4.71□□□□□ -1.66
SYNE2-223ENST00000557005 NDUFV2P19404 249 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 IDSP22304 550 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 GABRA3P34903 492 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 DLSTP36957 453 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 GUCA1AP43080 201 aaPredicted RBP4.71□□□□□ -1.66
SYNE2-223ENST00000557005 ARHGDIBP52566 201 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 GAB1Q13480 694 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 AANATQ16613 207 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 SAXO2Q658L1 398 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 BRAT1Q6PJG6 821 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 APOOLQ6UXV4 268 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 NRROSQ86YC3 692 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 CPOQ8IVL8 374 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 IQCF2Q8IXL9 164 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 TEX26Q8N6G2 289 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 NAXEQ8NCW5 288 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 OR4M1Q8NGD0 313 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 OR5AR1Q8NGP9 310 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 OR6N2Q8NGY6 317 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 OR56A3Q8NH54 315 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 OR51A7Q8NH64 312 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 PAQR8Q8TEZ7 354 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 NR4A3Q92570 626 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 SLC6A16Q9GZN6 736 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 PADI2Q9Y2J8 665 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 MRPS23Q9Y3D9 190 aaKnown RBP4.71□□□□□ -1.66
SYNE2-223ENST00000557005 WNT6Q9Y6F9 365 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 SIPA1L1O43166 1804 aa4.71□□□□□ -1.66
SYNE2-223ENST00000557005 FAM183AA6NL82 134 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 EMC8O43402 210 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ZNF35P13682 527 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 CPEP16870 476 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ZNF14P17017 642 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ZNF20P17024 532 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 DDCP20711 480 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 VAMP1P23763 118 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 HSD3B2P26439 372 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 PTH2RP49190 550 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 CLDN2P57739 230 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SORDQ00796 357 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ZNF91Q05481 1191 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SNTB2Q13425 540 aaKnown RBP4.7□□□□□ -1.66
SYNE2-223ENST00000557005 PLK5Q496M5 336 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 TOR2AQ5JU69 321 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 PYHIN1Q6K0P9 492 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 LEG1Q6P5S2 330 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SBSNQ6UWP8 590 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 QSOX2Q6ZRP7 698 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 Q6ZVL8 140 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 PRSS45Q7RTY3 260 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ZFP82Q8N141 532 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 BEST3Q8N1M1 668 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 NLGN4YQ8NFZ3 816 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-223ENST00000557005 OR2T35Q8NGX2 323 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ELP4Q96EB1 424 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 CNTNAP3BQ96NU0 1288 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 C1QTNF7Q9BXJ2 289 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 CST11Q9H112 138 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 NDUFB11Q9NX14 153 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 TMEFF2Q9UIK5 374 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SLC27A6Q9Y2P4 619 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 ZNF860A6NHJ4 632 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SOCS6O14544 535 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 SOCS5O75159 536 aa4.7□□□□□ -1.66
SYNE2-223ENST00000557005 GATBO75879 557 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms