RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 IGFBP7Q16270 282 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 C6orf163Q5TEZ5 329 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 LIPMQ5VYY2 423 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 C18orf63Q68DL7 685 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 CLEC6AQ6EIG7 209 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 PAPD4Q6PIY7 484 aaKnown RBP4.33□□□□□ -1.72
ATXN3-238ENST00000556288 PCSK4Q6UW60 755 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 ISLR2Q6UXK2 745 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 ZCCHC23Q6ZST2 131 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 PAGE2Q7Z2X7 111 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 MRGPRGQ86SM5 289 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 CROCCP2Q86T23 111 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 LCA5Q86VQ0 697 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 LDLRAD3Q86YD5 345 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 TDRPQ86YL5 185 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 DDIASQ8IXT1 998 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 LAS2Q8IYD9 372 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 ADGRG5Q8IZF4 528 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 CNPY4Q8N129 248 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 BANPQ8N9N5 519 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 L3MBTL4Q8NA19 623 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 LSM14AQ8ND56 463 aaKnown RBP4.33□□□□□ -1.72
ATXN3-238ENST00000556288 FAM156AQ8NDB6 213 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 BEND2Q8NDZ0 799 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 PLPP5Q8NEB5 264 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 CATSPER1Q8NEC5 780 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 SUN3Q8TAQ9 357 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 UCN3Q969E3 161 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 WDR34Q96EX3 536 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 SMIM10Q96HG1 83 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 APOPT1Q96IL0 206 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 PPP1R36Q96LQ0 422 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 ZNF354BQ96LW1 612 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 QRFPRQ96P65 431 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 DGAT2Q96PD7 388 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 TMEM237Q96Q45 408 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 OR1F2PQ96R84 312 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 AIFM2Q9BRQ8 373 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 TUBB6Q9BUF5 446 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 MECRQ9BV79 373 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 SARGQ9BW04 601 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 MRPL1Q9BYD6 325 aaKnown RBP4.33□□□□□ -1.72
ATXN3-238ENST00000556288 OR8D2Q9GZM6 311 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 AICDAQ9GZX7 198 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 ZNF700Q9H0M5 742 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 STMN4Q9H169 189 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-238ENST00000556288 EPS8L2Q9H6S3 715 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 RPF2Q9H7B2 306 aaKnown RBP4.33□□□□□ -1.72
ATXN3-238ENST00000556288 LIN28AQ9H9Z2 209 aaKnown RBP4.33□□□□□ -1.72
ATXN3-238ENST00000556288 EML4Q9HC35 981 aaKnown RBP4.33□□□□□ -1.72
ATXN3-238ENST00000556288 ZBTB20Q9HC78 741 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-238ENST00000556288 ZBTB26Q9HCK0 441 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 ARGLU1Q9NWB6 273 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-238ENST00000556288 ANKRD10Q9NXR5 420 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 ABI3Q9P2A4 366 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 TEKT2Q9UIF3 430 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 PHF11Q9UIL8 331 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 MID2Q9UJV3 735 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 RAB21Q9UL25 225 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 EMCNQ9ULC0 261 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 DAPP1Q9UN19 280 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 WDFY3Q8IZQ1 3526 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 CACNA1GO43497 2377 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 ZNF407Q9C0G0 2248 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 ITPR1Q14643 2758 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 FREM2Q5SZK8 3169 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 IGLV3-12A0A075B6K2 115 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 TRBV11-1A0A0K0K1C0 115 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 C17orf105B2RV13 164 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 WWP2O00308 870 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 FOXE1O00358 373 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-238ENST00000556288 PLPP1O14494 284 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 PGRMC2O15173 223 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 PROM1O43490 865 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 TRIAP1O43715 76 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 GUCY1B2O75343 617 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 ETHE1O95571 254 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 HSPA4LO95757 839 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 SERPINA7P05543 415 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 ENO1P06733 434 aaKnown RBP4.32□□□□□ -1.72
ATXN3-238ENST00000556288 RPS17P08708 135 aaKnown RBP4.32□□□□□ -1.72
ATXN3-238ENST00000556288 ANXA4P09525 319 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-238ENST00000556288 COX7A2P14406 83 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 CHN1P15882 459 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 NT5EP21589 574 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 HIST1H1TP22492 207 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-238ENST00000556288 PPP2R1BP30154 601 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 SLC7A1P30825 629 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 BSGP35613 385 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 FEN1P39748 380 aaKnown RBP4.32□□□□□ -1.72
ATXN3-238ENST00000556288 CLCN2P51788 898 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 XKP51811 444 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 HMGA2P52926 109 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 PKNOX1P55347 436 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 HNRNPH2P55795 449 aaKnown RBP4.32□□□□□ -1.72
ATXN3-238ENST00000556288 HSD17B7P56937 341 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 AP2B1P63010 937 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 HMGCS1Q01581 520 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 FOLH1Q04609 750 aa4.32□□□□□ -1.72
ATXN3-238ENST00000556288 ACSM2AQ08AH3 577 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms