RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 RPS6KA2Q15349 733 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 MPEG1Q2M385 716 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 NKAIN1Q4KMZ8 207 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 AGKQ53H12 422 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 ARHGAP40Q5TG30 622 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 FAM91A1Q658Y4 838 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 IGFL4Q6B9Z1 124 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 ANKRD26P1Q6NSI1 321 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 NIPAL1Q6NVV3 410 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 ZNF517Q6ZMY9 492 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-212ENST00000554486 IKBIPQ70UQ0 350 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 TIPARPQ7Z3E1 657 aaKnown RBP5.88□□□□□ -1.47
SCFD1-212ENST00000554486 DSELQ8IZU8 1212 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 FAM47BQ8NA70 645 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 OR7A2PQ8NGA2 310 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 OR51Q1Q8NH59 317 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 CDC26Q8NHZ8 85 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 DNAJB14Q8TBM8 379 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 SLC46A1Q96NT5 459 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 CCDC106Q9BWC9 280 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 ULBP3Q9BZM4 244 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 DPY30Q9C005 99 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 B3GNT4Q9C0J1 378 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 SLC7A5P2Q9GIP4 190 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 CLMPQ9H6B4 373 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 REEP4Q9H6H4 257 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 ZNF304Q9HCX3 659 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 ASCL3Q9NQ33 180 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 ARMCX1Q9P291 453 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 C5AR2Q9P296 337 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 CTSFQ9UBX1 484 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 ATP6V1HQ9UI12 483 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 PHF11Q9UIL8 331 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 CES1P1Q9UKY3 287 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 WBP11Q9Y2W2 641 aaKnown RBP5.88□□□□□ -1.47
SCFD1-212ENST00000554486 CACNA1AO00555 2505 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 WDFY3Q8IZQ1 3526 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 IGLV3-12A0A075B6K2 115 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 A0A1W2PS29 197 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 GAGE12BA1L429 117 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 FAM234BA2RU67 622 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 ASPDHA6ND91 283 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 GAGE12HA6NDE8 117 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 OR2W5A6NFC9 320 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 TMEM200CA6NKL6 621 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 VSTM2BA6NLU5 285 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 CDRT15L2A8MXV6 281 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 M0QYG6 137 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 PSMD12O00232 456 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-212ENST00000554486 RNASET2O00584 256 aaKnown RBP5.87□□□□□ -1.47
SCFD1-212ENST00000554486 SCAMP2O15127 329 aaKnown RBP5.87□□□□□ -1.47
SCFD1-212ENST00000554486 SLC22A2O15244 555 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 CNOT3O75175 753 aaKnown RBP5.87□□□□□ -1.47
SCFD1-212ENST00000554486 GUCY1B2O75343 617 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 DCTN3O75935 186 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 BMP10O95393 424 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 GPANK1O95872 356 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 NR2F6P10588 404 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 LAMP1P11279 417 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 MAKP20794 623 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 PRPS1L1P21108 318 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 SLC5A2P31639 672 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 HPCAL1P37235 193 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 XCR1P46094 333 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 ALDH9A1P49189 494 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 POLR2JP52435 117 aaKnown RBP5.87□□□□□ -1.47
SCFD1-212ENST00000554486 DGKQP52824 942 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 CLNS1AP54105 237 aaKnown RBP5.87□□□□□ -1.47
SCFD1-212ENST00000554486 WNT3P56703 355 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 FOXL2P58012 376 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 DCDP81605 110 aaKnown RBP5.87□□□□□ -1.47
SCFD1-212ENST00000554486 GABPB1Q06547 395 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-212ENST00000554486 HEPACAMQ14CZ8 416 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 VWA2Q5GFL6 755 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 SPANXN4Q5MJ08 99 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 SLC48A1Q6P1K1 146 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 FAM199XQ6PEV8 388 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-212ENST00000554486 FAM198BQ6UWH4 519 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 C6orf89Q6UWU4 347 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 TRPM8Q7Z2W7 1104 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 CAMKMTQ7Z624 323 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 TICAM1Q8IUC6 712 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 FAM9CQ8IZT9 166 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 POC1BQ8TC44 478 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 SLC25A43Q8WUT9 341 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-212ENST00000554486 FKBP10Q96AY3 582 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 ANKRD9Q96BM1 317 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-212ENST00000554486 TESCQ96BS2 214 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 TBC1D20Q96BZ9 403 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 COQ8BQ96D53 544 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 ERP27Q96DN0 273 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 ZNF764Q96H86 408 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-212ENST00000554486 ZNF681Q96N22 645 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 FAIM2Q9BWQ8 316 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 CHST8Q9H2A9 424 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 MKKSQ9NPJ1 570 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-212ENST00000554486 SLC52A3Q9NQ40 469 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 ARL8BQ9NVJ2 186 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 MS4A12Q9NXJ0 267 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 TAS2R7Q9NYW3 318 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 353.8 ms