RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 OR4N2Q8NGD1 307 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 GIPC3Q8TF64 312 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 RLIMQ9NVW2 624 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 MKL2Q9ULH7 1088 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 ZNF443Q9Y2A4 671 aaPredicted RBP18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 EFCAB7A8K855 629 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 ONECUT2O95948 504 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 POLR2IP36954 125 aaKnown RBP18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 NUBP1P53384 320 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 RAD23AP54725 363 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 IL11RAQ14626 422 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 NSDHLQ15738 373 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 ISLR2Q6UXK2 745 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 ZAR1Q86SH2 424 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 ATG16L2Q8NAA4 619 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 AGBL5Q8NDL9 886 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 OR7G1Q8NGA0 311 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 STT3BQ8TCJ2 826 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 CLIP3Q96DZ5 547 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 RMND5BQ96G75 393 aaPredicted RBP18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 PCDHGA8Q9Y5G5 932 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 ZNF318Q5VUA4 2279 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 CLDN24A6NM45 220 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 IGKV3-11P04433 115 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 THBS1P07996 1170 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 SLC37A1P57057 533 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 ELAVL1Q15717 326 aaKnown RBP18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 KRT80Q6KB66 452 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 TMEM154Q6P9G4 183 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 GALNT5Q7Z7M9 940 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 OFCC1Q8IZS5 231 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 SLC5A8Q8N695 610 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 ZNF321PQ8N8H1 164 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 SUMF1Q8NBK3 374 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 PLPP5Q8NEB5 264 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 PIK3C3Q8NEB9 887 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 C7orf57Q8NEG2 295 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 OR10G2Q8NGC3 310 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 PHF10Q8WUB8 498 aaKnown RBP18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 FEVQ99581 238 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 CTRCQ99895 268 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 POLE3Q9NRF9 147 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 COL5A1P20908 1838 aaPredicted RBP18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 TPST2O60704 377 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 DDAH2O95865 285 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 GUSBP08236 651 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 IL7RP16871 459 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 FOXL2P58012 376 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 EEF1A1P68104 462 aaKnown RBP18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 DCDP81605 110 aaKnown RBP18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 PIN1Q13526 163 aaPredicted RBP18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 ZSCAN1Q8NBB4 408 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 PMM1Q92871 262 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 MUS81Q96NY9 551 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 ALPK1Q96QP1 1244 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 PSD2Q9BQI7 771 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 ORC6Q9Y5N6 252 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 CLCA3PQ9Y6N3 262 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 NINQ8N4C6 2090 aa18.14■□□□□ 0.49
RBFOX1-215ENST00000553186 A8MUA0 341 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 PEX12O00623 359 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 FRS3O43559 492 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 IGKV1D-16P01601 117 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 HBQ1P09105 142 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 ZGLP1P0C6A0 271 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 TRHRP34981 398 aaPredicted RBP18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 LARS2Q15031 903 aaKnown RBP18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 TTC23Q5W5X9 447 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 ZNF836Q6ZNA1 936 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 FUZQ9BT04 418 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 ITPAQ9BY32 194 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 TRIM45Q9H8W5 580 aaPredicted RBP18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 PNPLA3Q9NST1 481 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 PRODH2Q9UF12 536 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 ZNF232Q9UNY5 417 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 NPIPA5A0A0B4J1W7 369 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 TRBV4-1A0A0J9YWV2 114 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 NPIPA7E9PJI5 369 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 SLC16A6O15403 523 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 UGT2B17O75795 530 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 NPIPA8P0DM63 369 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 ZNF770Q6IQ21 691 aaPredicted RBP18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 SHISA6Q6ZSJ9 500 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 ZNF721Q8TF20 911 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 CXorf56Q9H5V9 222 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 KRT84Q9NSB2 600 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 KIF17Q9P2E2 1029 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 SCOCQ9UIL1 159 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 SLC13A4Q9UKG4 626 aa18.13■□□□□ 0.49
RBFOX1-215ENST00000553186 ARRDC5A6NEK1 342 aa18.12■□□□□ 0.49
RBFOX1-215ENST00000553186 POLR1CO15160 346 aaPredicted RBP18.12■□□□□ 0.49
RBFOX1-215ENST00000553186 CBFA2T3O75081 653 aa18.12■□□□□ 0.49
RBFOX1-215ENST00000553186 DBIP07108 87 aaKnown RBP18.12■□□□□ 0.49
RBFOX1-215ENST00000553186 H1F0P07305 194 aaKnown RBP18.12■□□□□ 0.49
RBFOX1-215ENST00000553186 ITGAMP11215 1152 aa18.12■□□□□ 0.49
RBFOX1-215ENST00000553186 CCL4P13236 92 aa18.12■□□□□ 0.49
RBFOX1-215ENST00000553186 NID1P14543 1247 aa18.12■□□□□ 0.49
RBFOX1-215ENST00000553186 OR9Q2Q8NGE9 314 aa18.12■□□□□ 0.49
RBFOX1-215ENST00000553186 SLC2A12Q8TD20 617 aa18.12■□□□□ 0.49
RBFOX1-215ENST00000553186 PRRC1Q96M27 445 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms