RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 SLC35E2P0CK97 266 aa13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 RPS4Y1P22090 263 aaKnown RBP13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 RACK1P63244 317 aaKnown RBP13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 TSPAN31Q12999 210 aa13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 DECR1Q16698 335 aa13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 EIPR1Q53HC9 387 aa13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 MFSD4BQ5TF39 518 aa13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 MEDAGQ5VYS4 303 aa13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 ZNF730Q6ZMV8 503 aa13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 ZNF367Q7RTV3 350 aa13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 SLCO6A1Q86UG4 719 aa13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 KIF18BQ86Y91 864 aa13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 ZNF619Q8N2I2 560 aa13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 FAM26EQ8N5C1 309 aa13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 COX18Q8N8Q8 333 aa13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 PIK3R3Q92569 461 aa13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 TCTN2Q96GX1 697 aa13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 MAP3K3Q99759 626 aa13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 FOXQ1Q9C009 403 aa13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 GON4LQ3T8J9 2241 aa13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 CENPVL1A0A0U1RR11 272 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 EFCAB9A8MZ26 197 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 THY1P04216 161 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 CAPZBP47756 277 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 PCYT1AP49585 367 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 SMSP52788 366 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 EFNB1P98172 346 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 NCF4Q15080 339 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 MAPK14Q16539 360 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 DGUOKQ16854 277 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 ARMCX4Q5H9R4 360 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 SLC25A30Q5SVS4 291 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 AP1ARQ63HQ0 302 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 ACSM5Q6NUN0 579 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 RRM2BQ7LG56 351 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 GDF7Q7Z4P5 450 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 MEX3DQ86XN8 651 aaKnown RBP13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 NKAIN4Q8IVV8 208 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 PIGXQ8TBF5 258 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 ACOT11Q8WXI4 607 aaPredicted RBP13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 SLC41A3Q96GZ6 507 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 SLC38A3Q99624 504 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 TAS2R16Q9NYV7 291 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 RPL36Q9Y3U8 105 aaKnown RBP13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 THADAQ6YHU6 1953 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 A0A0A6YYC8 382 aaPredicted RBP13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 I3L1I5 382 aaPredicted RBP13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 TLX2O43763 284 aaPredicted RBP13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 AIREO43918 545 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 PRKYO43930 277 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 MED26O95402 600 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 NTN1O95631 604 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 CBX7O95931 251 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 AK1P00568 194 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 DBIP07108 87 aaKnown RBP13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 RNH1P13489 461 aaKnown RBP13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 GADD45AP24522 165 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 OMPP47874 163 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 ZNF136P52737 540 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 C21orf59P57076 290 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 STARD6P59095 220 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 MAP4K2Q12851 820 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 DGAT2L6Q6ZPD8 337 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 LINC00299Q6ZSB3 139 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 RASSF6Q6ZTQ3 369 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 C17orf82Q86X59 251 aaPredicted RBP13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 TOR1AIP2Q8NFQ8 470 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 GPR151Q8TDV0 419 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 VMP1Q96GC9 406 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 ALOXE3Q9BYJ1 711 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 PLA2G12AQ9BZM1 189 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 EGLN3Q9H6Z9 239 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 FBXO34Q9NWN3 711 aa13.05□□□□□ -0.32
RAB3IP-216ENST00000552199 FOXS1O43638 330 aa13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 KIAA0513O60268 411 aa13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 OR10H2O60403 315 aa13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 NADKO95544 446 aaPredicted RBP13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 GABRA3P34903 492 aa13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 UGT2B10P36537 528 aa13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 CLK1P49759 484 aaKnown RBP13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 POU6F2P78424 691 aaPredicted RBP13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 ZNF91Q05481 1191 aa13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 BCDIN3DQ7Z5W3 292 aaKnown RBP13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 MRGPREQ86SM8 312 aa13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 VWA5B2Q8N398 1253 aa13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 SLC15A4Q8N697 577 aa13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 WDR36Q8NI36 951 aaKnown RBP13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 TEX47Q8TBZ9 253 aa13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 HOXB13Q92826 284 aaPredicted RBP13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 PMM1Q92871 262 aa13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 FGF11Q92914 225 aa13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 TMEM80Q96HE8 168 aa13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 FAM46AQ96IP4 442 aaKnown RBP13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 OR5M11Q96RB7 305 aa13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 TSSK6Q9BXA6 273 aa13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 MIR1-1HGQ9H1L0 117 aa13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 DSN1Q9H410 356 aa13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 CNIH4Q9P003 139 aa13.04□□□□□ -0.32
RAB3IP-216ENST00000552199 KCNE5Q9UJ90 142 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms