RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 EFHD2Q96C19 240 aaPredicted RBP13.26□□□□□ -0.29
DDX54-203ENST00000546869 SPDL1Q96EA4 605 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 GPR137Q96N19 417 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 SLC35A5Q9BS91 424 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 DOHHQ9BU89 302 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 ZDHHC11Q9H8X9 412 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 HHATLQ9HCP6 504 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 PLSCR2Q9NRY7 297 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 TUBA8Q9NY65 449 aaPredicted RBP13.26□□□□□ -0.29
DDX54-203ENST00000546869 CCDC167Q9P0B6 97 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 BOKQ9UMX3 212 aaPredicted RBP13.26□□□□□ -0.29
DDX54-203ENST00000546869 GMEB1Q9Y692 573 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 A0A0G2JMM0 328 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 A0A1W2PP18 115 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 A0A1W2PPB8 328 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 A0A1W2PRS3 328 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 KIR3DP1A8MWS1 328 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 HS6ST1O60243 411 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 IGKV1D-16P01601 117 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 ELAVL4P26378 380 aaKnown RBP13.25□□□□□ -0.29
DDX54-203ENST00000546869 LSP1P33241 339 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 SOAT1P35610 550 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 CDKN2CP42773 168 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 GAS1P54826 345 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 PPIAP62937 165 aaKnown RBP13.25□□□□□ -0.29
DDX54-203ENST00000546869 TIGD2Q4W5G0 525 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 AGKQ53H12 422 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 LRIF1Q5T3J3 769 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 FNDC7Q5VTL7 733 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 DESI1Q6ICB0 168 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 ZNF621Q6ZSS3 439 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 COX18Q8N8Q8 333 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 ZFP90Q8TF47 636 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 C10orf82Q8WW14 230 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 RMND5BQ96G75 393 aaPredicted RBP13.25□□□□□ -0.29
DDX54-203ENST00000546869 OR7D2Q96RA2 312 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 YIPF4Q9BSR8 244 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 INPP5KQ9BT40 448 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 OSBPL11Q9BXB4 747 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 HOXD1Q9GZZ0 328 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 METTL7AQ9H8H3 244 aa13.25□□□□□ -0.29
DDX54-203ENST00000546869 A0A096LPI6 279 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 GMNCA6NCL1 334 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 ANKUB1A6NFN9 424 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 PRAMEF25A6NGN4 478 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 LRRC3CA6NJW4 275 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 SLC22A2O15244 555 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 WISP1O95388 367 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 KRT75O95678 551 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 IGHG3P01860 377 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 HOXB9P17482 250 aaPredicted RBP13.24□□□□□ -0.29
DDX54-203ENST00000546869 TBXA2RP21731 343 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 CLK3P49761 638 aaKnown RBP13.24□□□□□ -0.29
DDX54-203ENST00000546869 ANXA11P50995 505 aaKnown RBP13.24□□□□□ -0.29
DDX54-203ENST00000546869 PLGLB1Q02325 96 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.24□□□□□ -0.29
DDX54-203ENST00000546869 ARHGAP11BQ3KRB8 267 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 BICRALQ6AI39 1079 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 TIGD3Q6B0B8 471 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 HEPHL1Q6MZM0 1159 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 FAM109AQ8N4B1 249 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 OIT3Q8WWZ8 545 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 JADE3Q92613 823 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 CDS1Q92903 461 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 SLC35G5Q96KT7 338 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 ZNF597Q96LX8 424 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 PAIP1Q9H074 479 aaKnown RBP13.24□□□□□ -0.29
DDX54-203ENST00000546869 SERHL2Q9H4I8 314 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 ACKR4Q9NPB9 350 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 SDHAF3Q9NRP4 125 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 EXD2Q9NVH0 621 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 KLRF1Q9NZS2 232 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 B4GALT7Q9UBV7 327 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 SEC14L3Q9UDX4 400 aa13.24□□□□□ -0.29
DDX54-203ENST00000546869 A0A1B0GVC2 190 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 ALG1L2C9J202 215 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 NPIPA5E9PKD4 350 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 G3V3Y1 287 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 ADAM10O14672 748 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 TFECO14948 347 aaPredicted RBP13.23□□□□□ -0.29
DDX54-203ENST00000546869 SNPHO15079 494 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 CBR3O75828 277 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 UTS2O95399 124 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 CAPN3P20807 821 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 EVI2BP34910 448 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 CHI3L1P36222 383 aaPredicted RBP13.23□□□□□ -0.29
DDX54-203ENST00000546869 MVDP53602 400 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 SEC24CP53992 1094 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 SLC10A1Q14973 349 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 CMPK2Q5EBM0 449 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 DCST2Q5T1A1 773 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 CLEC4FQ8N1N0 589 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 GHDCQ8N2G8 530 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 DPP10Q8N608 796 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 TMEM251Q8N6I4 163 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 WDSUB1Q8N9V3 476 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 OR52N2Q8NGI0 321 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 OR1J4Q8NGS1 313 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 FBXO30Q8TB52 745 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 PMM1Q92871 262 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms