RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 GTPBP3Q969Y2 492 aaKnown RBP13.16□□□□□ -0.3
RTN3-214ENST00000545432 NXNL1Q96CM4 212 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 ADGRG7Q96K78 797 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 FRG2BQ96QU4 278 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 TRAF4Q9BUZ4 470 aaPredicted RBP13.16□□□□□ -0.3
RTN3-214ENST00000545432 HDHD5Q9BXW7 423 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 MRPL1Q9BYD6 325 aaKnown RBP13.16□□□□□ -0.3
RTN3-214ENST00000545432 RTN4RQ9BZR6 473 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 STMN4Q9H169 189 aaPredicted RBP13.16□□□□□ -0.3
RTN3-214ENST00000545432 BARX1Q9HBU1 254 aaPredicted RBP13.16□□□□□ -0.3
RTN3-214ENST00000545432 AHSPQ9NZD4 102 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 PSME2Q9UL46 239 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 PPP2R2CQ9Y2T4 447 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 RNF115Q9Y4L5 304 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 ANGPTL3Q9Y5C1 460 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 PCNX3Q9H6A9 2034 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 IGLV3-32A0A0A0MS00 114 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 ELOA3DA6NLF2 546 aaPredicted RBP13.15□□□□□ -0.3
RTN3-214ENST00000545432 SYCE1LA8MT33 242 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 OR7A17O14581 309 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 GCM2O75603 506 aaPredicted RBP13.15□□□□□ -0.3
RTN3-214ENST00000545432 ERAL1O75616 437 aaKnown RBP13.15□□□□□ -0.3
RTN3-214ENST00000545432 SSTR1P30872 391 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 SPRP35270 261 aaPredicted RBP13.15□□□□□ -0.3
RTN3-214ENST00000545432 PIK3CGP48736 1102 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 MAPK12P53778 367 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 CORO7P57737 925 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 MRPS35P82673 323 aaKnown RBP13.15□□□□□ -0.3
RTN3-214ENST00000545432 GALNT1Q10472 559 aaPredicted RBP13.15□□□□□ -0.3
RTN3-214ENST00000545432 TMEM249Q2WGJ8 235 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 ELOA3BQ3SY89 546 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 GRTP1Q5TC63 336 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 RAET1LQ5VY80 246 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 COMMD6Q7Z4G1 85 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 CMC1Q7Z7K0 106 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 CENPLQ8N0S6 344 aaPredicted RBP13.15□□□□□ -0.3
RTN3-214ENST00000545432 STEAP2Q8NFT2 490 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 ELOA3Q8NG57 546 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 C1GALT1C1Q96EU7 318 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 TNFRSF13CQ96RJ3 184 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 HBEGFQ99075 208 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 C19orf24Q9BVV8 132 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 SDHAF3Q9NRP4 125 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 PAQR5Q9NXK6 330 aaPredicted RBP13.15□□□□□ -0.3
RTN3-214ENST00000545432 MED11Q9P086 117 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 LPAR3Q9UBY5 353 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 ABCG2Q9UNQ0 655 aa13.15□□□□□ -0.3
RTN3-214ENST00000545432 TNPO3Q9Y5L0 923 aaKnown RBP13.15□□□□□ -0.3
RTN3-214ENST00000545432 YLPM1P49750 1951 aaKnown RBP13.14□□□□□ -0.31
RTN3-214ENST00000545432 TCRBV9S1A1TA0A576 114 aa13.14□□□□□ -0.31
RTN3-214ENST00000545432 ADAMDEC1O15204 470 aa13.14□□□□□ -0.31
RTN3-214ENST00000545432 SEC14L5O43304 696 aa13.14□□□□□ -0.31
RTN3-214ENST00000545432 PLOD3O60568 738 aa13.14□□□□□ -0.31
RTN3-214ENST00000545432 TCEA1P23193 301 aaKnown RBP13.14□□□□□ -0.31
RTN3-214ENST00000545432 ADH6P28332 368 aa13.14□□□□□ -0.31
RTN3-214ENST00000545432 EVI2BP34910 448 aa13.14□□□□□ -0.31
RTN3-214ENST00000545432 PSG6Q00889 435 aa13.14□□□□□ -0.31
RTN3-214ENST00000545432 PFKFB4Q16877 469 aa13.14□□□□□ -0.31
RTN3-214ENST00000545432 CTU2Q2VPK5 515 aaKnown RBP13.14□□□□□ -0.31
RTN3-214ENST00000545432 CCDC91Q7Z6B0 441 aa13.14□□□□□ -0.31
RTN3-214ENST00000545432 TBC1D1Q86TI0 1168 aaPredicted RBP13.14□□□□□ -0.31
RTN3-214ENST00000545432 ZBED8Q8IZ13 594 aa13.14□□□□□ -0.31
RTN3-214ENST00000545432 GABRG1Q8N1C3 465 aa13.14□□□□□ -0.31
RTN3-214ENST00000545432 UHMK1Q8TAS1 419 aaKnown RBP13.14□□□□□ -0.31
RTN3-214ENST00000545432 ROBO4Q8WZ75 1007 aa13.14□□□□□ -0.31
RTN3-214ENST00000545432 NEUROG1Q92886 237 aa13.14□□□□□ -0.31
RTN3-214ENST00000545432 GPR78Q96P69 363 aa13.14□□□□□ -0.31
RTN3-214ENST00000545432 USB1Q9BQ65 265 aaKnown RBP13.14□□□□□ -0.31
RTN3-214ENST00000545432 TRIM2Q9C040 744 aa13.14□□□□□ -0.31
RTN3-214ENST00000545432 PTGES2Q9H7Z7 377 aa13.14□□□□□ -0.31
RTN3-214ENST00000545432 PPP4R1LQ9P1A2 415 aa13.14□□□□□ -0.31
RTN3-214ENST00000545432 TXNDC16Q9P2K2 825 aa13.14□□□□□ -0.31
RTN3-214ENST00000545432 SNX12Q9UMY4 172 aa13.14□□□□□ -0.31
RTN3-214ENST00000545432 IGHV4-30-2A0A087WSY4 118 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 GOLGA6L6A8MZA4 724 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 H3BML4 177 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 KRT20P35900 424 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 ACAP2Q15057 778 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 GGTA1PQ4G0N0 100 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 MFSD12Q6NUT3 480 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 LRRC8AQ8IWT6 810 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 CCDC116Q8IYX3 515 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 OR4N2Q8NGD1 307 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 OR52B6Q8NGF0 335 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 OR5M1Q8NGP8 315 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 PIWIL2Q8TC59 973 aaKnown RBP13.13□□□□□ -0.31
RTN3-214ENST00000545432 PYROXD1Q8WU10 500 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 HSD17B8Q92506 261 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 S100PBPQ96BU1 408 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 RHNO1Q9BSD3 238 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 AMBRA1Q9C0C7 1298 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 ESRP2Q9H6T0 727 aaKnown RBP13.13□□□□□ -0.31
RTN3-214ENST00000545432 NOL11Q9H8H0 719 aaKnown RBP13.13□□□□□ -0.31
RTN3-214ENST00000545432 ANKRA2Q9H9E1 313 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 FOLH1BQ9HBA9 442 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 GDF2Q9UK05 429 aaPredicted RBP13.13□□□□□ -0.31
RTN3-214ENST00000545432 SNX8Q9Y5X2 465 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 ZNF780BQ9Y6R6 833 aa13.13□□□□□ -0.31
RTN3-214ENST00000545432 A0A1W2PP18 115 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 DPRXA6NFQ7 191 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms