RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 CYC1P08574 325 aa6.52□□□□□ -1.36
SRGAP1-206ENST00000543397 LAMP1P11279 417 aa6.52□□□□□ -1.36
SRGAP1-206ENST00000543397 NR4A1P22736 598 aa6.52□□□□□ -1.36
SRGAP1-206ENST00000543397 AOAHP28039 575 aa6.52□□□□□ -1.36
SRGAP1-206ENST00000543397 SFTPDP35247 375 aa6.52□□□□□ -1.36
SRGAP1-206ENST00000543397 SGSHP51688 502 aa6.52□□□□□ -1.36
SRGAP1-206ENST00000543397 SLC3A1Q07837 685 aa6.52□□□□□ -1.36
SRGAP1-206ENST00000543397 IL18R1Q13478 541 aa6.52□□□□□ -1.36
SRGAP1-206ENST00000543397 GINS1Q14691 196 aa6.52□□□□□ -1.36
SRGAP1-206ENST00000543397 RUNDC3AQ59EK9 446 aa6.52□□□□□ -1.36
SRGAP1-206ENST00000543397 FAM209AQ5JX71 171 aa6.52□□□□□ -1.36
SRGAP1-206ENST00000543397 PLEKHG7Q6ZR37 379 aa6.52□□□□□ -1.36
SRGAP1-206ENST00000543397 TCEANCQ8N8B7 351 aa6.52□□□□□ -1.36
SRGAP1-206ENST00000543397 FKBP10Q96AY3 582 aa6.52□□□□□ -1.36
SRGAP1-206ENST00000543397 APIPQ96GX9 242 aa6.52□□□□□ -1.36
SRGAP1-206ENST00000543397 PHF12Q96QT6 1004 aa6.52□□□□□ -1.36
SRGAP1-206ENST00000543397 MROQ9BYG7 248 aa6.52□□□□□ -1.36
SRGAP1-206ENST00000543397 ANKRA2Q9H9E1 313 aa6.52□□□□□ -1.36
SRGAP1-206ENST00000543397 MBD1Q9UIS9 605 aaPredicted RBP6.52□□□□□ -1.36
SRGAP1-206ENST00000543397 COL18A1P39060 1754 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 ZNF878C9JN71 531 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 TEX46H3BTG2 121 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 DHRS4L1P0CG22 281 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 GCGRP47871 477 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 AQP4P55087 323 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 RNF4P78317 190 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 E2F2Q14209 437 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 C2orf76Q3KRA6 126 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 ABCA11PQ4W5N1 156 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 EEF1A1P5Q5VTE0 462 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 TMEM17Q86X19 198 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 CLECL1Q8IZS7 167 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 NINJ1Q92982 152 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 MOCOSQ96EN8 888 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 NARS2Q96I59 477 aaKnown RBP6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 ZNF559Q9BR84 538 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 C7orf50Q9BRJ6 194 aaKnown RBP6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 PADI1Q9ULC6 663 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 TMEM14AQ9Y6G1 99 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 GXYLT2A0PJZ3 443 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 FMO6PO60774 539 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 PEPDP12955 493 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 PRKCAP17252 672 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 OR1D4P47884 311 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 PITPNBP48739 271 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 ENTPD1P49961 510 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 ALDH3A2P51648 485 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 HSD11B2P80365 405 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 MALLQ13021 153 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 C3orf38Q5JPI3 329 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 KANK2Q63ZY3 851 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 ADAMTSL4Q6UY14 1074 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 TMEM184AQ6ZMB5 413 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 LINGO2Q7L985 606 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 SMIM15Q7Z3B0 74 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 PRR22Q8IZ63 422 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 SPEM1Q8N4L4 309 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 ZNF611Q8N823 705 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 OR5K2Q8NHB8 316 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 TMEM19Q96HH6 336 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 KCTD7Q96MP8 289 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 OR6C1Q96RD1 312 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 FAM129BQ96TA1 746 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 MACROD1Q9BQ69 325 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 CXorf21Q9HAI6 301 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 TREX1Q9NSU2 369 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 UNC119BA6NIH7 251 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 LDB3O75112 727 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 RAB3DO95716 219 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 APOC1P02654 83 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 CALCBP10092 127 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 ETFAP13804 333 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 PGAM2P15259 253 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 AZGP1P25311 298 aaKnown RBP6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 GDF1P27539 372 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 GMPRP36959 345 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 MC3RP41968 323 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 EPHA4P54764 986 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 TAS2R43P59537 309 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 EEF1A2Q05639 463 aaKnown RBP6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 LETMD1Q6P1Q0 360 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 RSPO2Q6UXX9 243 aaPredicted RBP6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 MSANTD1Q6ZTZ1 278 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 LHFPL2Q6ZUX7 228 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 GID4Q8IVV7 300 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 ZNF619Q8N2I2 560 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 C19orf47Q8N9M1 422 aaKnown RBP6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 OR52N2Q8NGI0 321 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 OR9A2Q8NGT5 310 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 OR9A4Q8NGU2 314 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 SEC14L1Q92503 715 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 MAELQ96JY0 434 aaKnown RBP6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 FER1L6-AS2Q96M78 137 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 PIP5K1AQ99755 562 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 SARDHQ9UL12 918 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 VDAC3Q9Y277 283 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 PRSS21Q9Y6M0 314 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 ANKRD36CQ5JPF3 1778 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 APC2O95996 2303 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 BTBD17A6NE02 478 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms