RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 TNK1Q13470 666 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 CAPRIN1Q14444 709 aaKnown RBP8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 ZNF267Q14586 743 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 XKR7Q5GH72 579 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 HHATQ5VTY9 493 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 OR52E8Q6IFG1 317 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 FAM71E1Q6IPT2 247 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 TRILQ7L0X0 811 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 BTLAQ7Z6A9 289 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 C7orf57Q8NEG2 295 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 OR14A16Q8NHC5 309 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 FAM76AQ8TAV0 307 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 SLC2A12Q8TD20 617 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 SREK1Q8WXA9 508 aaKnown RBP8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 DAZLQ92904 295 aaKnown RBP8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 VMP1Q96GC9 406 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 METTL2AQ96IZ6 378 aaKnown RBP8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 FCRL1Q96LA6 429 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 DGAT2Q96PD7 388 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 DEFB126Q9BYW3 111 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 OR8D2Q9GZM6 311 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 PNPOQ9NVS9 261 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 C1orf109Q9NX04 203 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 ALKBH4Q9NXW9 302 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 BAIAP2L1Q9UHR4 511 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 HAO1Q9UJM8 370 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 RAP2CQ9Y3L5 183 aa8.09□□□□□ -1.11
TRAPPC1-202ENST00000540486 MGAM2Q2M2H8 2515 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 TRBV11-1A0A0K0K1C0 115 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 GNG14A0A1W2PPG7 69 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 SYNDIG1LA6NDD5 238 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 TMCC2O75069 709 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 PEX11AO75192 247 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 SNNO75324 88 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 SKAP2O75563 359 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 ERAL1O75616 437 aaKnown RBP8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 ZFAND5O76080 213 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 HSPA4LO95757 839 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 NID1P14543 1247 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 PORP16435 677 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 GRK2P25098 689 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 TIMP3P35625 211 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 ALDH9A1P49189 494 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 GPR85P60893 370 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 ERVK-8P63133 956 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 RNF4P78317 190 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 PLGLB1Q02325 96 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 FUT7Q11130 342 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 SPRED3Q2MJR0 410 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 PRICKLE4Q2TBC4 344 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 C6orf136Q5SQH8 315 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 POMZP3Q6PJE2 187 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 FAM111BQ6SJ93 734 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 DDIASQ8IXT1 998 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 CYP4Z2PQ8N1L4 340 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 RIT1Q92963 219 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 CTHRC1Q96CG8 243 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 FAIM2Q9BWQ8 316 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 MANSC1Q9H8J5 431 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 CXorf21Q9HAI6 301 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 TAS2R7Q9NYW3 318 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 ZNF639Q9UID6 485 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 UTS2RQ9UKP6 389 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 ERVK-19Q9WJR5 959 aa8.08□□□□□ -1.12
TRAPPC1-202ENST00000540486 SH3D21A4FU49 640 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 SERINC4A6NH21 518 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 OR10H2O60403 315 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 ITGA10O75578 1167 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 CHEK2O96017 543 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 NEFHP12036 1026 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 SDC1P18827 310 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 CSNK2A2P19784 350 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 DDCP20711 480 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 SSTR4P31391 388 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 GSTM5P46439 218 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 MAN2A2P49641 1150 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 HK2P52789 917 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 SLC37A1P57057 533 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 PLIN5Q00G26 463 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 ZNF763Q0D2J5 394 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 MAP4K2Q12851 820 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 HEPACAMQ14CZ8 416 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 LTB4RQ15722 352 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 MPEG1Q2M385 716 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 GALNTL6Q49A17 601 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 PDLIM3Q53GG5 364 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 TRMT12Q53H54 448 aaKnown RBP8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 WIPI1Q5MNZ9 446 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 MDGA2Q7Z553 956 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 HOMEZQ8IX15 550 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 C9orf40Q8IXQ3 194 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 FBXW8Q8N3Y1 598 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 LIX1Q8N485 282 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 TMEM156Q8N614 296 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 ZNF615Q8N8J6 731 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 ADCY4Q8NFM4 1077 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 OR8K3Q8NH51 312 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 ZNF75CPQ92670 426 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 EXOSC8Q96B26 276 aaKnown RBP8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 FBXL20Q96IG2 436 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms