RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 GABRA1P14867 456 aa13.62□□□□□ -0.23
USB1-203ENST00000539737 NTSP30990 170 aa13.62□□□□□ -0.23
USB1-203ENST00000539737 CEACAM8P31997 349 aaPredicted RBP13.62□□□□□ -0.23
USB1-203ENST00000539737 FEN1P39748 380 aaKnown RBP13.62□□□□□ -0.23
USB1-203ENST00000539737 FBXW4P57775 412 aa13.62□□□□□ -0.23
USB1-203ENST00000539737 NKX6-1P78426 367 aaPredicted RBP13.62□□□□□ -0.23
USB1-203ENST00000539737 HSPB2Q16082 182 aa13.62□□□□□ -0.23
USB1-203ENST00000539737 SMU1Q2TAY7 513 aa13.62□□□□□ -0.23
USB1-203ENST00000539737 RFTN2Q52LD8 501 aaPredicted RBP13.62□□□□□ -0.23
USB1-203ENST00000539737 PRR22Q8IZ63 422 aa13.62□□□□□ -0.23
USB1-203ENST00000539737 FBXW8Q8N3Y1 598 aa13.62□□□□□ -0.23
USB1-203ENST00000539737 C9orf106Q8NAJ2 232 aa13.62□□□□□ -0.23
USB1-203ENST00000539737 FNDC5Q8NAU1 212 aa13.62□□□□□ -0.23
USB1-203ENST00000539737 OR7G1Q8NGA0 311 aa13.62□□□□□ -0.23
USB1-203ENST00000539737 TIMP4Q99727 224 aa13.62□□□□□ -0.23
USB1-203ENST00000539737 WWTR1Q9GZV5 400 aa13.62□□□□□ -0.23
USB1-203ENST00000539737 SLC35C2Q9NQQ7 365 aa13.62□□□□□ -0.23
USB1-203ENST00000539737 ATRQ13535 2644 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 STAB1Q9NY15 2570 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 TRIM64A6NGJ6 449 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 TRIM64BA6NI03 449 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 FAM47E-STBD1D6RA91 191 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 SLCO1B7G3V0H7 640 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 PEX11AO75192 247 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 SLITRK5O94991 958 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 CLPSP04118 112 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 HRGP04196 525 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 EPXP11678 715 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 BCKDHAP12694 445 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 HPCAL1P37235 193 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 RPL3P39023 403 aaKnown RBP13.61□□□□□ -0.23
USB1-203ENST00000539737 OCRLQ01968 901 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 FUT7Q11130 342 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 DAZAP2Q15038 168 aaPredicted RBP13.61□□□□□ -0.23
USB1-203ENST00000539737 WIPI1Q5MNZ9 446 aaPredicted RBP13.61□□□□□ -0.23
USB1-203ENST00000539737 TBCELQ5QJ74 424 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 C6orf136Q5SQH8 315 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 LUZP2Q86TE4 346 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 CXorf67Q86X51 503 aaPredicted RBP13.61□□□□□ -0.23
USB1-203ENST00000539737 LRRC34Q8IZ02 419 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 FAM9CQ8IZT9 166 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 ZNF675Q8TD23 568 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 NUDT8Q8WV74 236 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 DYDC1Q8WWB3 177 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 ERP27Q96DN0 273 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 C3orf30Q96M34 536 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 ZNF681Q96N22 645 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 GNRHR2Q96P88 292 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 TSSK3Q96PN8 268 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 BBS4Q96RK4 519 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 YIPF4Q9BSR8 244 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 DOHHQ9BU89 302 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 BRINP2Q9C0B6 783 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 TAS2R7Q9NYW3 318 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 EIF3LQ9Y262 564 aaKnown RBP13.61□□□□□ -0.23
USB1-203ENST00000539737 CFL2Q9Y281 166 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 WIF1Q9Y5W5 379 aa13.61□□□□□ -0.23
USB1-203ENST00000539737 SONP18583 2426 aaKnown RBP13.6□□□□□ -0.23
USB1-203ENST00000539737 C2orf72A6NCS6 295 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 TRPC5OSA6NMA1 111 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 TBX19O60806 448 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 EPPINO95925 133 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 JUNP05412 331 aaKnown RBP13.6□□□□□ -0.23
USB1-203ENST00000539737 HEXAP06865 529 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 FBXO45P0C2W1 286 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 PRPS2P11908 318 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 SSTR4P31391 388 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 MPIP34949 423 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 SLC37A1P57057 533 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 MAP4K2Q12851 820 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 EBPQ15125 230 aaKnown RBP13.6□□□□□ -0.23
USB1-203ENST00000539737 PRICKLE4Q2TBC4 344 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 FBXL19-AS1Q494R0 122 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 Q5PR19 223 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 FNDC7Q5VTL7 733 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 R3HCC1LQ7Z5L2 792 aaKnown RBP13.6□□□□□ -0.23
USB1-203ENST00000539737 CAMKMTQ7Z624 323 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 LRRC8CQ8TDW0 803 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 TP53INP1Q96A56 240 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 PPCDCQ96CD2 204 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 MTERF3Q96E29 417 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 PIGQQ9BRB3 760 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 C1orf50Q9BV19 199 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 REEP4Q9H6H4 257 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 MEAF6Q9HAF1 191 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 PNPOQ9NVS9 261 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 ZNF446Q9NWS9 450 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 ASIC5Q9NY37 505 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 MAT2BQ9NZL9 334 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 NOP53Q9NZM5 478 aaKnown RBP13.6□□□□□ -0.23
USB1-203ENST00000539737 C6orf203Q9P0P8 240 aaPredicted RBP13.6□□□□□ -0.23
USB1-203ENST00000539737 GIMAP2Q9UG22 337 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 EXPH5Q8NEV8 1989 aa13.6□□□□□ -0.23
USB1-203ENST00000539737 GNB5O14775 395 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 HDAC3O15379 428 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 SIAH2O43255 324 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 TRIM3O75382 744 aaPredicted RBP13.59□□□□□ -0.23
USB1-203ENST00000539737 BCAS2O75934 225 aaPredicted RBP13.59□□□□□ -0.23
USB1-203ENST00000539737 CT62P0C5K7 136 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 BMP7P18075 431 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms