RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 ZNF621Q6ZSS3 439 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 NET1Q7Z628 596 aaPredicted RBP11.95□□□□□ -0.5
CCDC42-202ENST00000539522 GALNT10Q86SR1 603 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 PTRH1Q86Y79 214 aaKnown RBP11.95□□□□□ -0.5
CCDC42-202ENST00000539522 C10orf67Q8IYJ2 551 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 HORMAD2Q8N7B1 307 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 BCORP1Q8N888 145 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 CDRT4Q8N9R6 151 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 FAM13CQ8NE31 585 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 OR10G3Q8NGC4 313 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 OR8J3Q8NGG0 315 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 OR56A1Q8NGH5 318 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 PNPT1Q8TCS8 783 aaKnown RBP11.95□□□□□ -0.5
CCDC42-202ENST00000539522 CDS1Q92903 461 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 SPACA9Q96E40 222 aaPredicted RBP11.95□□□□□ -0.5
CCDC42-202ENST00000539522 OMA1Q96E52 524 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 CLPTM1LQ96KA5 538 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 OR7D2Q96RA2 312 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 NODALQ96S42 347 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 RSPO3Q9BXY4 272 aaPredicted RBP11.95□□□□□ -0.5
CCDC42-202ENST00000539522 C3orf14Q9HBI5 128 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 LUZP4Q9P127 313 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 CD300AQ9UGN4 299 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 GMEB1Q9Y692 573 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 HMGN4O00479 90 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 DNAJA2O60884 412 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 PPM1BO75688 479 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 SORBS2O94875 1100 aaKnown RBP11.94□□□□□ -0.5
CCDC42-202ENST00000539522 ANP32DO95626 131 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 NUDT7P0C024 238 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 GABRA3P34903 492 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 PIGAP37287 484 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 SLC7A2P52569 658 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 DCAF7P61962 342 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 PRR5P85299 388 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 CEACAM7Q14002 265 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 CAPRIN1Q14444 709 aaKnown RBP11.94□□□□□ -0.5
CCDC42-202ENST00000539522 IRAK1BP1Q5VVH5 260 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 HEPHL1Q6MZM0 1159 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 SZRD1Q7Z422 152 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 RNF130Q86XS8 419 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 SLC34A3Q8N130 599 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 SLC15A4Q8N697 577 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 RAB8BQ92930 207 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 TMEM125Q96AQ2 219 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 MOAP1Q96BY2 351 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 HSPBAP1Q96EW2 488 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 ANKRD27Q96NW4 1050 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 TAAR6Q96RI8 345 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 CPPED1Q9BRF8 314 aaPredicted RBP11.94□□□□□ -0.5
CCDC42-202ENST00000539522 UTP23Q9BRU9 249 aaKnown RBP11.94□□□□□ -0.5
CCDC42-202ENST00000539522 SLC39A3Q9BRY0 314 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 ACTRT3Q9BYD9 372 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 OR51I1Q9H343 314 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 PIGUQ9H490 435 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 CMTM6Q9NX76 183 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 LRFN1Q9P244 771 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 ABCD2Q9UBJ2 740 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 SLC7A8Q9UHI5 535 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 CNOT11Q9UKZ1 510 aaKnown RBP11.94□□□□□ -0.5
CCDC42-202ENST00000539522 VPS4AQ9UN37 437 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 CFL2Q9Y281 166 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 NTNG1Q9Y2I2 539 aa11.94□□□□□ -0.5
CCDC42-202ENST00000539522 PCNX3Q9H6A9 2034 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 CENPVL1A0A0U1RR11 272 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 A8MVJ9 347 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 EVPLLA8MZ36 301 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 ACOX3O15254 700 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 KCNK2O95069 426 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 HSD17B1P14061 328 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 MATN1P21941 496 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 PPIBP23284 216 aaKnown RBP11.93□□□□□ -0.5
CCDC42-202ENST00000539522 CYB561P49447 251 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 GAS1P54826 345 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 ARG2P78540 354 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 MRPS22P82650 360 aaKnown RBP11.93□□□□□ -0.5
CCDC42-202ENST00000539522 TRAP1Q12931 704 aaKnown RBP11.93□□□□□ -0.5
CCDC42-202ENST00000539522 TRIM25Q14258 630 aaKnown RBP11.93□□□□□ -0.5
CCDC42-202ENST00000539522 INPP5JQ15735 1006 aaPredicted RBP11.93□□□□□ -0.5
CCDC42-202ENST00000539522 SPDYE7PQ495Y7 208 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 PRR30Q53SZ7 412 aaPredicted RBP11.93□□□□□ -0.5
CCDC42-202ENST00000539522 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.93□□□□□ -0.5
CCDC42-202ENST00000539522 FNDC7Q5VTL7 733 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 TNFAIP8L2Q6P589 184 aaPredicted RBP11.93□□□□□ -0.5
CCDC42-202ENST00000539522 ZCCHC12Q6PEW1 402 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 APOOLQ6UXV4 268 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 HPS6Q86YV9 775 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 CYP4Z2PQ8N1L4 340 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 TRIML2Q8N7C3 387 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 OR5M3Q8NGP4 307 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 PAQR8Q8TEZ7 354 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 ASB15Q8WXK1 588 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 SLC9A6Q92581 669 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 EFHD2Q96C19 240 aaPredicted RBP11.93□□□□□ -0.5
CCDC42-202ENST00000539522 SLC35G5Q96KT7 338 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 STACQ99469 402 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 ECSITQ9BQ95 431 aa11.93□□□□□ -0.5
CCDC42-202ENST00000539522 THUMPD3Q9BV44 507 aaKnown RBP11.93□□□□□ -0.5
CCDC42-202ENST00000539522 DENND2DQ9H6A0 471 aaPredicted RBP11.93□□□□□ -0.5
CCDC42-202ENST00000539522 TPT1P8Q9HAU6 139 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms