RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 RUVBL2Q9Y230 463 aaKnown RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 EXOC6BQ9Y2D4 811 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 WDR37Q9Y2I8 494 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 MRPL11Q9Y3B7 192 aaKnown RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 OR1A2Q9Y585 309 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 MYH15Q9Y2K3 1946 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 METP08581 1390 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 MRC2Q9UBG0 1479 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 BAZ1BQ9UIG0 1483 aaKnown RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ATP8B3O60423 1300 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 EPRSP07814 1512 aaKnown RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 MEX3AA1L020 520 aaKnown RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 F5H6K3 240 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SIGLEC5O15389 551 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 OR6B1O95007 311 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 OAS1P00973 400 aaKnown RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 STSP08842 583 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 HBQ1P09105 142 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SLC2A2P11168 524 aaPredicted RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 CD80P33681 288 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 OR1G1P47890 313 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 LEPRP48357 1165 aaKnown RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 KLRC3Q07444 240 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 HYAL1Q12794 435 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 PPP1R8Q12972 351 aaKnown RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 NME3Q13232 169 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 CAMK4Q16566 473 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 DGUOKQ16854 277 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF699Q32M78 642 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 MS4A18Q3C1V0 323 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 NADK2Q4G0N4 442 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 KCTD21Q4G0X4 260 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 EOGTQ5NDL2 527 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 LCE1FQ5T754 118 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SEL1L2Q5TEA6 688 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 LCN1P1Q5VSP4 162 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ARHGEF16Q5VV41 709 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 TMEM225Q6GV28 225 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 BHLHB9Q6PI77 547 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ERICH1Q86X53 443 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 LRRC75A-AS1Q8N1F1 130 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ELMOD1Q8N336 334 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SPEM1Q8N4L4 309 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 POC1AQ8NBT0 407 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 OR9A1PQ8NGU1 263 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ANKRD49Q8WVL7 239 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SHC3Q92529 594 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 HAS2Q92819 552 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 TSACCQ96A04 125 aaPredicted RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SLC35C1Q96A29 364 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 COG3Q96JB2 828 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 VSTM2LQ96N03 204 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ERGIC2Q96RQ1 377 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 MTG1Q9BT17 334 aaPredicted RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 CCDC28BQ9BUN5 200 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 C1QTNF4Q9BXJ3 329 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 IDI2Q9BXS1 227 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 WDR13Q9H1Z4 485 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 PORCNQ9H237 461 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 METTL8Q9H825 291 aaKnown RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SLC7A10Q9NS82 523 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SLC35D1Q9NTN3 355 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 EMCNQ9ULC0 261 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 RABL2BQ9UNT1 228 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 MFHAS1Q9Y4C4 1052 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ETV7Q9Y603 341 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SPHKAPQ2M3C7 1700 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SHANK2Q9UPX8 1470 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 WDR90Q96KV7 1748 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 A0A087WZ39 114 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 TRAV39A0A0B4J263 110 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 CFAP73A6NFT4 308 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 NPIPB9F8W1W9 429 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 H0YL77 283 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 H7C0C1 242 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 CHUKO15111 745 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 PRKAB2O43741 272 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 KIAA0513O60268 411 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 VENTXO95231 258 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 GJB5O95377 273 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 IGKV2-30P06310 120 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 SP1P08047 785 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 ACKR3P25106 362 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 MARCKSP29966 332 aaPredicted RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 PPP2R1BP30154 601 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 HSD17B2P37059 387 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 SLC1A3P43003 542 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 ATP5OP48047 213 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 RIDAP52758 137 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 NAPAP54920 295 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 HADHBP55084 474 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 GPX6P59796 221 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 ABCE1P61221 599 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 YWHAGP61981 247 aaKnown RBP eCLIP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 HERV-K104P63124 156 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 NAAAQ02083 359 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 HEPACAMQ14CZ8 416 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 BCL2A1Q16548 175 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 KLHL40Q2TBA0 621 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 NKAIN1Q4KMZ8 207 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms