RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 NCBP2P52298 156 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 HNRNPFP52597 415 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 SERTAD2Q14140 314 aa11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 KRT72Q14CN4 511 aa11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 DAZAP2Q15038 168 aaPredicted RBP11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 GXYLT1Q4G148 440 aa11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 ZNF385BQ569K4 471 aa11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 RTL6Q6ICC9 239 aa11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 FAM180BQ6P0A1 224 aa11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 MSANTD1Q6ZTZ1 278 aa11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 ANKRD46Q86W74 232 aa11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 RPS19BP1Q86WX3 136 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 TREML1Q86YW5 311 aa11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 FUNDC1Q8IVP5 155 aa11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 LRRC25Q8N386 305 aaPredicted RBP11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 ZFP62Q8NB50 900 aaPredicted RBP11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 OR8J2Q8NGG1 315 aa11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 OR4A15Q8NGL6 344 aa11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 ELP5Q8TE02 316 aa11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 UCN3Q969E3 161 aa11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 CIDECQ96AQ7 238 aaPredicted RBP11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 COQ8BQ96D53 544 aa11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 ZNF764Q96H86 408 aaPredicted RBP11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 ITCHQ96J02 903 aa11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 DGAT2Q96PD7 388 aa11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 PELOQ9BRX2 385 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 PNPLA3Q9NST1 481 aa11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 ARL8BQ9NVJ2 186 aa11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 C19orf25Q9UFG5 118 aaPredicted RBP11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 FAM215AQ9Y5M1 114 aa11.49□□□□□ -0.57
CLSTN3-208ENST00000538933 SYNDIG1LA6NDD5 238 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 CAPN14A8MX76 684 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 INAFM1C9JVW0 142 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 SYT5O00445 386 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 RNASET2O00584 256 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 RFXANKO14593 260 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 MRASO14807 208 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 RRP9O43818 475 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 FGF17O60258 216 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 UBOX5O94941 541 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 KCNH1O95259 989 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 C6orf47O95873 294 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 CPMP14384 443 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 PORP16435 677 aaPredicted RBP11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 MAOAP21397 527 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 NT5EP21589 574 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 CALB2P22676 271 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 SOAT1P35610 550 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 CPA2P48052 419 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 CYB561P49447 251 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 HLCSP50747 726 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 NKX6-1P78426 367 aaPredicted RBP11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 BTG2P78543 158 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 HSPB3Q12988 150 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 BIKQ13323 160 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 NFYCQ13952 458 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 KEAP1Q14145 624 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 SPDYE7PQ495Y7 208 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 REP15Q6BDI9 236 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 PAPD4Q6PIY7 484 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 SLC2A7Q6PXP3 512 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 QSOX2Q6ZRP7 698 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 SZRD1Q7Z422 152 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 CCDC116Q8IYX3 515 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 ARMC10Q8N2F6 343 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 KIF2BQ8N4N8 673 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 TRIML2Q8N7C3 387 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 TMEM52Q8NDY8 209 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 OR5M3Q8NGP4 307 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 RCN3Q96D15 328 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 RBM18Q96H35 190 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 PANX1Q96RD7 426 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 ALOXE3Q9BYJ1 711 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 EFCAB1Q9HAE3 211 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 NEUROD4Q9HD90 331 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 GID8Q9NWU2 228 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 TAS2R7Q9NYW3 318 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 EXO1Q9UQ84 846 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 SNX8Q9Y5X2 465 aa11.48□□□□□ -0.57
CLSTN3-208ENST00000538933 MYOCOSA0A1B0GUC4 107 aa11.47□□□□□ -0.57
CLSTN3-208ENST00000538933 PRSS51A0A1B0GVH4 220 aa11.47□□□□□ -0.57
CLSTN3-208ENST00000538933 WASHC1A8K0Z3 465 aa11.47□□□□□ -0.57
CLSTN3-208ENST00000538933 PEX1O43933 1283 aa11.47□□□□□ -0.57
CLSTN3-208ENST00000538933 ATP5HO75947 161 aa11.47□□□□□ -0.57
CLSTN3-208ENST00000538933 CD53P19397 219 aa11.47□□□□□ -0.57
CLSTN3-208ENST00000538933 ACVR2AP27037 513 aa11.47□□□□□ -0.57
CLSTN3-208ENST00000538933 NUDT2P50583 147 aa11.47□□□□□ -0.57
CLSTN3-208ENST00000538933 MLF1P58340 268 aa11.47□□□□□ -0.57
CLSTN3-208ENST00000538933 SLC26A5P58743 744 aa11.47□□□□□ -0.57
CLSTN3-208ENST00000538933 NSDHLQ15738 373 aa11.47□□□□□ -0.57
CLSTN3-208ENST00000538933 SLC25A35Q3KQZ1 300 aa11.47□□□□□ -0.57
CLSTN3-208ENST00000538933 FLYWCH1Q4VC44 716 aa11.47□□□□□ -0.57
CLSTN3-208ENST00000538933 SFT2D3Q587I9 215 aa11.47□□□□□ -0.57
CLSTN3-208ENST00000538933 SHEQ5VZ18 495 aa11.47□□□□□ -0.57
CLSTN3-208ENST00000538933 ANGPTL8Q6UXH0 198 aa11.47□□□□□ -0.57
CLSTN3-208ENST00000538933 DNAJC14Q6Y2X3 702 aaPredicted RBP11.47□□□□□ -0.57
CLSTN3-208ENST00000538933 DHDDSQ86SQ9 333 aa11.47□□□□□ -0.57
CLSTN3-208ENST00000538933 CXorf67Q86X51 503 aaPredicted RBP11.47□□□□□ -0.57
CLSTN3-208ENST00000538933 OR10Q1Q8NGQ4 319 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms