RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 DUSP5Q16690 384 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 SAMD14Q8IZD0 417 aaPredicted RBP12.5□□□□□ -0.41
VPS33B-202ENST00000535906 TDHQ8IZJ6 230 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 OR8J1Q8NGP2 316 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 OR52P1PQ8NH57 321 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 TMEM80Q96HE8 168 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 OPALINQ96PE5 141 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 GPR174Q9BXC1 333 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 STARD5Q9NSY2 213 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 SEMA4GQ9NTN9 838 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 QPCTLQ9NXS2 382 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 NTNG1Q9Y2I2 539 aa12.5□□□□□ -0.41
VPS33B-202ENST00000535906 LSM2Q9Y333 95 aaKnown RBP12.5□□□□□ -0.41
VPS33B-202ENST00000535906 PRKYO43930 277 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 CYP7B1O75881 506 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 IGLV3-19P01714 112 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 ZNF10P21506 573 aaPredicted RBP12.49□□□□□ -0.41
VPS33B-202ENST00000535906 GIPRP48546 466 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 EIF2B2P49770 351 aaKnown RBP12.49□□□□□ -0.41
VPS33B-202ENST00000535906 ACSM5Q6NUN0 579 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 KIF18BQ86Y91 864 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 LINC00471Q8N535 108 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 DIO2Q92813 273 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 PLA2G12AQ9BZM1 189 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 RACGAP1Q9H0H5 632 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 SLC13A4Q9UKG4 626 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 RPL36Q9Y3U8 105 aaKnown RBP12.49□□□□□ -0.41
VPS33B-202ENST00000535906 KIR2DS5A0A0G2JLQ3 304 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 A0A0G2JNG1 304 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 A0A0J9YY10 115 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 KIR2DS3K7RE56 304 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 TLX2O43763 284 aaPredicted RBP12.49□□□□□ -0.41
VPS33B-202ENST00000535906 FGF17O60258 216 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 PRKAR1BP31321 381 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 CCR5P51681 352 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 GINS1Q14691 196 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 KIR2DS5Q14953 304 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 NDUFA9Q16795 377 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 ZNF628Q5EBL2 1059 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 ENTPD8Q5MY95 495 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 CCNJQ5T5M9 372 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 MFSD4BQ5TF39 518 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 TYW3Q6IPR3 259 aaKnown RBP12.49□□□□□ -0.41
VPS33B-202ENST00000535906 RNF44Q7L0R7 432 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 PRICKLE2Q7Z3G6 844 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 EGLN3Q9H6Z9 239 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 HHATLQ9HCP6 504 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 LYRM4Q9HD34 91 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 INIPQ9NRY2 104 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 PTGFRNQ9P2B2 879 aa12.49□□□□□ -0.41
VPS33B-202ENST00000535906 FAM221BA6H8Z2 402 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 CYR61O00622 381 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 GPX5O75715 221 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 ACP2P11117 423 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 GLULP15104 373 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 TYRP1P17643 537 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 VSX2P58304 361 aaPredicted RBP12.48□□□□□ -0.41
VPS33B-202ENST00000535906 CDK5Q00535 292 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 HHEXQ03014 270 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 OCLNQ16625 522 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 PUS10Q3MIT2 529 aaKnown RBP12.48□□□□□ -0.41
VPS33B-202ENST00000535906 FHL5Q5TD97 284 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 RNLSQ5VYX0 342 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 LSRQ86X29 649 aaPredicted RBP12.48□□□□□ -0.41
VPS33B-202ENST00000535906 FAM160A2Q8N612 972 aaPredicted RBP12.48□□□□□ -0.41
VPS33B-202ENST00000535906 POC5Q8NA72 575 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 FAM83FQ8NEG4 500 aaPredicted RBP12.48□□□□□ -0.41
VPS33B-202ENST00000535906 RLN3Q8WXF3 142 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 RSC1A1Q92681 617 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 MND1Q9BWT6 205 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 IL21RQ9HBE5 538 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 FAM60AQ9NP50 221 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 GPR27Q9NS67 375 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 WSB2Q9NYS7 404 aaPredicted RBP12.48□□□□□ -0.41
VPS33B-202ENST00000535906 CLEC2DQ9UHP7 191 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 WDR45Q9Y484 360 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 MYO15AQ9UKN7 3530 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 LAMA1P25391 3075 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 CENPVL1A0A0U1RR11 272 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 PNMA8CA0A1B0GUJ8 204 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 TMEM221A6NGB7 291 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 OR5K4A6NMS3 321 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 CSO75390 466 aaKnown RBP12.48□□□□□ -0.41
VPS33B-202ENST00000535906 PTTG1O95997 202 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 THY1P04216 161 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 CTSBP07858 339 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 CCNYL3P0C7X3 344 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 CTSEP14091 401 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 ENDOUP21128 410 aaKnown RBP12.48□□□□□ -0.41
VPS33B-202ENST00000535906 SEPHS1P49903 392 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 SHC2P98077 582 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 MLLT1Q03111 559 aaPredicted RBP12.48□□□□□ -0.41
VPS33B-202ENST00000535906 ZNF91Q05481 1191 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 ARHGAP11BQ3KRB8 267 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 NKAIN4Q8IVV8 208 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 SLC34A3Q8N130 599 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 CSNK1A1LQ8N752 337 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 HPS1Q92902 700 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 SDF2Q99470 211 aa12.48□□□□□ -0.41
VPS33B-202ENST00000535906 NUAK2Q9H093 628 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms