RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 C11orf71Q6IPW1 123 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 ALKBH2Q6NS38 261 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 SLC48A1Q6P1K1 146 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 FIGNL1Q6PIW4 674 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 ZNF662Q6ZS27 426 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 LARP4Q71RC2 724 aaKnown RBP eCLIP6.95□□□□□ -1.3
NXF1-215ENST00000533440 ATG4DQ86TL0 474 aaPredicted RBP6.95□□□□□ -1.3
NXF1-215ENST00000533440 STK32CQ86UX6 486 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 EXOC3L1Q86VI1 746 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 MEX3DQ86XN8 651 aaKnown RBP6.95□□□□□ -1.3
NXF1-215ENST00000533440 PDIK1LQ8N165 341 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 OR5M1Q8NGP8 315 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 PIWIL2Q8TC59 973 aaKnown RBP6.95□□□□□ -1.3
NXF1-215ENST00000533440 HSD17B8Q92506 261 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 EXT2Q93063 718 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 MS4A14Q96JA4 679 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 ADGRG7Q96K78 797 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 ATOH8Q96SQ7 321 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 HBEGFQ99075 208 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 ADAM19Q9H013 955 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 L2HGDHQ9H9P8 463 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 CAB39LQ9H9S4 337 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 SAYSD1Q9NPB0 183 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 SMYD2Q9NRG4 433 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 GLRX2Q9NS18 164 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 NSMCE4AQ9NXX6 385 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 CISD1Q9NZ45 108 aaKnown RBP6.95□□□□□ -1.3
NXF1-215ENST00000533440 NUDT4Q9NZJ9 180 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 MED11Q9P086 117 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 PPP4R1LQ9P1A2 415 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 ADAM29Q9UKF5 820 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 MTO1Q9Y2Z2 717 aaKnown RBP6.95□□□□□ -1.3
NXF1-215ENST00000533440 PCDHA9Q9Y5H5 950 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 SNX8Q9Y5X2 465 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 TRRAPQ9Y4A5 3859 aa6.95□□□□□ -1.3
NXF1-215ENST00000533440 UQCRHLA0A096LP55 91 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 C1orf226A1L170 272 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 SLC35F4A4IF30 521 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 SHISA9B4DS77 424 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 C3orf80F5H4A9 247 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 FADS1O60427 444 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 UGDHO60701 494 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 BCAS2O75934 225 aaPredicted RBP6.94□□□□□ -1.3
NXF1-215ENST00000533440 PLGP00747 810 aaPredicted RBP6.94□□□□□ -1.3
NXF1-215ENST00000533440 KLK1P06870 262 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 PCSK2P16519 638 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 CSNK2A2P19784 350 aaPredicted RBP6.94□□□□□ -1.3
NXF1-215ENST00000533440 IL12BP29460 328 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 AGTR1P30556 359 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 EVI2BP34910 448 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 GZMKP49863 264 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 CORO7P57737 925 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 MRPS35P82673 323 aaKnown RBP6.94□□□□□ -1.3
NXF1-215ENST00000533440 SQLEQ14534 574 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 LTB4RQ15722 352 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 ZKSCAN8Q15776 578 aaPredicted RBP6.94□□□□□ -1.3
NXF1-215ENST00000533440 CPSF6Q16630 551 aaKnown RBP eCLIP6.94□□□□□ -1.3
NXF1-215ENST00000533440 SFRP5Q5T4F7 317 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 MFSD12Q6NUT3 480 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 NPSR1Q6W5P4 371 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 IL17RELQ6ZVW7 336 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 ISCA2Q86U28 154 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 MYLK4Q86YV6 388 aaPredicted RBP6.94□□□□□ -1.3
NXF1-215ENST00000533440 GABRG1Q8N1C3 465 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 TEX9Q8N6V9 391 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 L3MBTL4Q8NA19 623 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 TRIM58Q8NG06 486 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 OR52B6Q8NGF0 335 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 STAG3L4Q8TBR4 150 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 ZNF675Q8TD23 568 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 C10orf105Q8TEF2 133 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 PROX1Q92786 737 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 C1GALT1C1Q96EU7 318 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 TSPAN17Q96FV3 270 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 ADAD1Q96M93 576 aaKnown RBP6.94□□□□□ -1.3
NXF1-215ENST00000533440 VSTM2LQ96N03 204 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 ZNF681Q96N22 645 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 SERPINI1Q99574 410 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 USB1Q9BQ65 265 aaKnown RBP6.94□□□□□ -1.3
NXF1-215ENST00000533440 CACNG6Q9BXT2 260 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 PRRG4Q9BZD6 226 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 DDX47Q9H0S4 455 aaKnown RBP6.94□□□□□ -1.3
NXF1-215ENST00000533440 ALG9Q9H6U8 611 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 PTGES2Q9H7Z7 377 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 FAIMQ9NVQ4 179 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 FBXO34Q9NWN3 711 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 PAQR5Q9NXK6 330 aaPredicted RBP6.94□□□□□ -1.3
NXF1-215ENST00000533440 KCNS2Q9ULS6 477 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 DYSFO75923 2080 aa6.94□□□□□ -1.3
NXF1-215ENST00000533440 PLCE1Q9P212 2302 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 GOLGA8QA0A0J9YX86 632 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 GOLGA8OA6NCC3 632 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 GOLGA8NF8WBI6 632 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 GOLGA8RI6L899 631 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 UBXN8O00124 270 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 EIF1AYO14602 144 aaKnown RBP6.93□□□□□ -1.3
NXF1-215ENST00000533440 ADAMDEC1O15204 470 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 SCO2O43819 266 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 RAMP1O60894 148 aa6.93□□□□□ -1.3
NXF1-215ENST00000533440 KERAO60938 352 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms