RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 PDE9AO76083 593 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 KCNK2O95069 426 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 LDLRP01130 860 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 IDO1P14902 403 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 CD1EP15812 388 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 ENDOUP21128 410 aaKnown RBP12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 PTPN6P29350 595 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 AQP5P55064 265 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 RPP38P78345 283 aaKnown RBP12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 PRR5P85299 388 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 EFR3AQ14156 821 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 LASP1Q14847 261 aaKnown RBP12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 SLC10A1Q14973 349 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 C3AR1Q16581 482 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 GSTA3Q16772 222 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 ANXA8L1Q5VT79 327 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 CDC73Q6P1J9 531 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 C6orf120Q7Z4R8 191 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 DOLPP1Q86YN1 238 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 OR9I1Q8NGQ6 314 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 FBXO30Q8TB52 745 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 STON2Q8WXE9 905 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 TMCO6Q96DC7 493 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 OTUB1Q96FW1 271 aaPredicted RBP12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 CCDC115Q96NT0 180 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 STACQ99469 402 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 CCDC28BQ9BUN5 200 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 PIGUQ9H490 435 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 SLC52A3Q9NQ40 469 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 TCF7L2Q9NQB0 619 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 SERHLQ9NQF3 203 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 DUSP22Q9NRW4 184 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 QPCTLQ9NXS2 382 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 ZIM2Q9NZV7 527 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 BTNL2Q9UIR0 455 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 C15orf41Q9Y2V0 281 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 SNX8Q9Y5X2 465 aa12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 USP9YO00507 2555 aaPredicted RBP12.73□□□□□ -0.37
TSPAN4-220ENST00000532375 ACOT7O00154 380 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 GNB5O14775 395 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 LRRTM2O43300 516 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 SLC22A3O75751 556 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 HPNP05981 417 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 PGRP06401 933 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 S100A3P33764 101 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 PRIM2P49643 509 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 ZNHIT3Q15649 155 aaPredicted RBP12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 DECR1Q16698 335 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 C1QL3Q5VWW1 255 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 PAOXQ6QHF9 649 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 PACS2Q86VP3 889 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 FUNDC1Q8IVP5 155 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 GLB1L3Q8NCI6 653 aaPredicted RBP12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 OR56A1Q8NGH5 318 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 OR4C3Q8NH37 302 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 OR5AK3PQ8NH89 298 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 RFWD2Q8NHY2 731 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 GPR151Q8TDV0 419 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 SLC9A6Q92581 669 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 MOAP1Q96BY2 351 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 RMND5BQ96G75 393 aaPredicted RBP12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 ZNF597Q96LX8 424 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 INPP5KQ9BT40 448 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 OSBPL11Q9BXB4 747 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 ACTRT3Q9BYD9 372 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 METTL7AQ9H8H3 244 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 MED4Q9NPJ6 270 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 FAM120CQ9NX05 1096 aaKnown RBP12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 SLC5A6Q9Y289 635 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 DOPEY1Q5JWR5 2465 aa12.72□□□□□ -0.37
TSPAN4-220ENST00000532375 PTPN13Q12923 2485 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 SPTBN1Q01082 2364 aaKnown RBP12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 CFLARO15519 480 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 SUSD5O60279 629 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 CDC40O60508 579 aaKnown RBP eCLIP12.71□□□□□ -0.372e-6■■■■■ 31.7
TSPAN4-220ENST00000532375 CPSF4O95639 269 aaKnown RBP12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 ALOX5P09917 674 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 IL12BP29460 328 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 PTGS2P35354 604 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 CDKN2CP42773 168 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 TP53BP2Q13625 1128 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 GRAMD1BQ3KR37 738 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 VPS26BQ4G0F5 336 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 AP1ARQ63HQ0 302 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 SAXO2Q658L1 398 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 CGB2Q6NT52 195 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 ARHGAP11AQ6P4F7 1023 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 ANGPTL8Q6UXH0 198 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 SZRD1Q7Z422 152 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 GALNT10Q86SR1 603 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 OR4A15Q8NGL6 344 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 FAM57AQ8TBR7 257 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 MIPOL1Q8TD10 442 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 CDS1Q92903 461 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 JSRP1Q96MG2 331 aaPredicted RBP12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 PSMG3-AS1Q96PY0 264 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 PHF12Q96QT6 1004 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 OR7D2Q96RA2 312 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms