RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 CTBP2P56545 445 aa16.94■□□□□ 0.3
SSRP1-204ENST00000529002 GTF2H2Q13888 395 aa16.94■□□□□ 0.3
SSRP1-204ENST00000529002 EFR3AQ14156 821 aa16.94■□□□□ 0.3
SSRP1-204ENST00000529002 PFKFB4Q16877 469 aa16.94■□□□□ 0.3
SSRP1-204ENST00000529002 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.94■□□□□ 0.3
SSRP1-204ENST00000529002 ZNF672Q499Z4 452 aaPredicted RBP16.94■□□□□ 0.3
SSRP1-204ENST00000529002 GTF2H2CQ6P1K8 395 aa16.94■□□□□ 0.3
SSRP1-204ENST00000529002 GGNQ86UU5 652 aa16.94■□□□□ 0.3
SSRP1-204ENST00000529002 ZBED8Q8IZ13 594 aa16.94■□□□□ 0.3
SSRP1-204ENST00000529002 ZNF681Q96N22 645 aa16.94■□□□□ 0.3
SSRP1-204ENST00000529002 BTBD9Q96Q07 612 aa16.94■□□□□ 0.3
SSRP1-204ENST00000529002 TACO1Q9BSH4 297 aaKnown RBP16.94■□□□□ 0.3
SSRP1-204ENST00000529002 LRRC1Q9BTT6 524 aa16.94■□□□□ 0.3
SSRP1-204ENST00000529002 TRIM31Q9BZY9 425 aa16.94■□□□□ 0.3
SSRP1-204ENST00000529002 C1orf226A1L170 272 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 E7ESA3 106 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 EIF1AYO14602 144 aaKnown RBP16.93■□□□□ 0.3
SSRP1-204ENST00000529002 EVI2BP34910 448 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 ALDH9A1P49189 494 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 RPS3AP61247 264 aaKnown RBP16.93■□□□□ 0.3
SSRP1-204ENST00000529002 IRF9Q00978 393 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 RUNX1T1Q06455 604 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 SGO1Q5FBB7 561 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 LGSNQ5TDP6 509 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 MFSD12Q6NUT3 480 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 RAPH1Q70E73 1250 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 SLC44A2Q8IWA5 706 aaPredicted RBP16.93■□□□□ 0.3
SSRP1-204ENST00000529002 CCDC116Q8IYX3 515 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 GBP7Q8N8V2 638 aaPredicted RBP16.93■□□□□ 0.3
SSRP1-204ENST00000529002 L3MBTL4Q8NA19 623 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 KCTD4Q8WVF5 259 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 HTRA1Q92743 480 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 TM4SF18Q96CE8 201 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 DTNBP1Q96EV8 351 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 TNFRSF13CQ96RJ3 184 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 RHNO1Q9BSD3 238 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 TRAF4Q9BUZ4 470 aaPredicted RBP16.93■□□□□ 0.3
SSRP1-204ENST00000529002 NMRAL1Q9HBL8 299 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 ZBTB26Q9HCK0 441 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 GPR52Q9Y2T5 361 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 JRKLQ9Y4A0 524 aa16.93■□□□□ 0.3
SSRP1-204ENST00000529002 RAMP1O60894 148 aa16.92■□□□□ 0.3
SSRP1-204ENST00000529002 SS18L1O75177 396 aaPredicted RBP16.92■□□□□ 0.3
SSRP1-204ENST00000529002 ZNF16P17020 682 aaPredicted RBP16.92■□□□□ 0.3
SSRP1-204ENST00000529002 KRT20P35900 424 aa16.92■□□□□ 0.3
SSRP1-204ENST00000529002 ARL1P40616 181 aaPredicted RBP16.92■□□□□ 0.3
SSRP1-204ENST00000529002 PNLIPRP2P54317 469 aa16.92■□□□□ 0.3
SSRP1-204ENST00000529002 CASP9P55211 416 aa16.92■□□□□ 0.3
SSRP1-204ENST00000529002 TAB1Q15750 504 aa16.92■□□□□ 0.3
SSRP1-204ENST00000529002 ZNF628Q5EBL2 1059 aa16.92■□□□□ 0.3
SSRP1-204ENST00000529002 BEND4Q6ZU67 534 aa16.92■□□□□ 0.3
SSRP1-204ENST00000529002 KLHL7Q8IXQ5 586 aa16.92■□□□□ 0.3
SSRP1-204ENST00000529002 METTL4Q8N3J2 472 aa16.92■□□□□ 0.3
SSRP1-204ENST00000529002 OR52B6Q8NGF0 335 aa16.92■□□□□ 0.3
SSRP1-204ENST00000529002 UHMK1Q8TAS1 419 aaKnown RBP16.92■□□□□ 0.3
SSRP1-204ENST00000529002 DUSP19Q8WTR2 217 aa16.92■□□□□ 0.3
SSRP1-204ENST00000529002 GFM2Q969S9 779 aaKnown RBP16.92■□□□□ 0.3
SSRP1-204ENST00000529002 GMPPAQ96IJ6 420 aaPredicted RBP16.92■□□□□ 0.3
SSRP1-204ENST00000529002 VSTM2LQ96N03 204 aa16.92■□□□□ 0.3
SSRP1-204ENST00000529002 NPAS1Q99742 590 aa16.92■□□□□ 0.3
SSRP1-204ENST00000529002 CPNE1Q99829 537 aa16.92■□□□□ 0.3
SSRP1-204ENST00000529002 TXNDC16Q9P2K2 825 aa16.92■□□□□ 0.3
SSRP1-204ENST00000529002 B3GALT5Q9Y2C3 310 aa16.92■□□□□ 0.3
SSRP1-204ENST00000529002 OR7A17O14581 309 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 FADS1O60427 444 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 UGDHO60701 494 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 SEC31AO94979 1220 aaKnown RBP16.91■□□□□ 0.3
SSRP1-204ENST00000529002 ALDOAP04075 364 aaKnown RBP16.91■□□□□ 0.3
SSRP1-204ENST00000529002 LTA4HP09960 611 aaKnown RBP16.91■□□□□ 0.3
SSRP1-204ENST00000529002 FCGR2AP12318 317 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 GFAPP14136 432 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 PSMB1P20618 241 aaKnown RBP16.91■□□□□ 0.3
SSRP1-204ENST00000529002 IL11P20809 199 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 GP5P40197 560 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 BSPH1Q075Z2 132 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 SH2D4BQ5SQS7 431 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 FIGNL1Q6PIW4 674 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 COMMD6Q7Z4G1 85 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 MARCH3Q86UD3 253 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 OR9A2Q8NGT5 310 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 OR10D3Q8NH80 312 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 C1GALT1C1Q96EU7 318 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 C11orf24Q96F05 449 aaPredicted RBP16.91■□□□□ 0.3
SSRP1-204ENST00000529002 SHARPINQ9H0F6 387 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 NOL11Q9H8H0 719 aaKnown RBP16.91■□□□□ 0.3
SSRP1-204ENST00000529002 LRTM1Q9HBL6 345 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 PFDN4Q9NQP4 134 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 FARSBQ9NSD9 589 aaKnown RBP16.91■□□□□ 0.3
SSRP1-204ENST00000529002 WHRNQ9P202 907 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 ADAM29Q9UKF5 820 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 PPP2R2CQ9Y2T4 447 aa16.91■□□□□ 0.3
SSRP1-204ENST00000529002 DPRXA6NFQ7 191 aa16.9■□□□□ 0.3
SSRP1-204ENST00000529002 CXCL13O43927 109 aa16.9■□□□□ 0.3
SSRP1-204ENST00000529002 GCM2O75603 506 aaPredicted RBP16.9■□□□□ 0.3
SSRP1-204ENST00000529002 CLDN9O95484 217 aa16.9■□□□□ 0.3
SSRP1-204ENST00000529002 C21orf58P58505 322 aa16.9■□□□□ 0.3
SSRP1-204ENST00000529002 GALNT1Q10472 559 aaPredicted RBP16.9■□□□□ 0.3
SSRP1-204ENST00000529002 SEZ6L2Q6UXD5 910 aa16.9■□□□□ 0.3
SSRP1-204ENST00000529002 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.9■□□□□ 0.3
SSRP1-204ENST00000529002 TBC1D1Q86TI0 1168 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms