RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 VPS4AQ9UN37 437 aa5.97□□□□□ -1.45
CD44-214ENST00000525211 NDUFAF1Q9Y375 327 aa5.97□□□□□ -1.45
CD44-214ENST00000525211 ITPR1Q14643 2758 aa5.96□□□□□ -1.45
CD44-214ENST00000525211 FRG2CA6NGY1 282 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 CLDN24A6NM45 220 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 OR6C76A6NM76 312 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 A8MVJ9 347 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 NME4O00746 187 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 LCE2BO14633 110 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 PCDH17O14917 1159 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 TO15178 435 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 ZNHIT1O43257 154 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 FCMRO60667 390 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 PRAMEF2O60811 474 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 TNFRSF21O75509 655 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 NEURL1O76050 574 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 KCNK2O95069 426 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 CCL3P10147 92 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 CYP4B1P13584 511 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 DRD5P21918 477 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 SLC6A2P23975 617 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 PRDX6P30041 224 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 ADSLP30566 484 aaPredicted RBP5.96□□□□□ -1.46
CD44-214ENST00000525211 MSX2P35548 267 aaPredicted RBP5.96□□□□□ -1.46
CD44-214ENST00000525211 CHI3L1P36222 383 aaPredicted RBP5.96□□□□□ -1.46
CD44-214ENST00000525211 PIGAP37287 484 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 CRYBA2P53672 197 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 MRPS22P82650 360 aaKnown RBP5.96□□□□□ -1.46
CD44-214ENST00000525211 PMP22Q01453 160 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 BIKQ13323 160 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 KRT72Q14CN4 511 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 RGNQ15493 299 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 MAPK14Q16539 360 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 TRMT5Q32P41 509 aaKnown RBP5.96□□□□□ -1.46
CD44-214ENST00000525211 NDUFAF6Q330K2 333 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 NADK2Q4G0N4 442 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 HEPHL1Q6MZM0 1159 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 CALHM3Q86XJ0 350 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 SLC15A3Q8IY34 581 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 ZZZ3Q8IYH5 903 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 SAMD14Q8IZD0 417 aaPredicted RBP5.96□□□□□ -1.46
CD44-214ENST00000525211 BCORP1Q8N888 145 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 FAM156AQ8NDB6 213 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 RBM15BQ8NDT2 890 aaKnown RBP5.96□□□□□ -1.46
CD44-214ENST00000525211 MDS2Q8NDY4 140 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 OR10G3Q8NGC4 313 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 OR52N2Q8NGI0 321 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 OR4C3Q8NH37 302 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 OR8K3Q8NH51 312 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 RP9Q8TA86 221 aaKnown RBP5.96□□□□□ -1.46
CD44-214ENST00000525211 NUBPLQ8TB37 319 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 MIPOL1Q8TD10 442 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 TSPEARQ8WU66 669 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 XAGE5Q8WWM1 108 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 JADE3Q92613 823 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 OMA1Q96E52 524 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 RMND5BQ96G75 393 aaPredicted RBP5.96□□□□□ -1.46
CD44-214ENST00000525211 NSL1Q96IY1 281 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 LCORQ96JN0 433 aaPredicted RBP5.96□□□□□ -1.46
CD44-214ENST00000525211 CLPTM1LQ96KA5 538 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 ZNF583Q96ND8 569 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 ANKRD27Q96NW4 1050 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 IP6K3Q96PC2 410 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 MS4A4EQ96PG1 132 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 SDF2Q99470 211 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 NPAS1Q99742 590 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 WFDC6Q9BQY6 131 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 ACTRT3Q9BYD9 372 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 PIGUQ9H490 435 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 C3orf14Q9HBI5 128 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 TMEM45AQ9NWC5 275 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 STMN3Q9NZ72 180 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.96□□□□□ -1.46
CD44-214ENST00000525211 TAGLN3Q9UI15 199 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 FOXD3Q9UJU5 478 aaPredicted RBP5.96□□□□□ -1.46
CD44-214ENST00000525211 CNOT11Q9UKZ1 510 aaKnown RBP5.96□□□□□ -1.46
CD44-214ENST00000525211 CHST2Q9Y4C5 530 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 NPFFR2Q9Y5X5 522 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 PIEZO2Q9H5I5 2752 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 NBEAQ8NFP9 2946 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 PCNX3Q9H6A9 2034 aa5.96□□□□□ -1.46
CD44-214ENST00000525211 ZFYVE26Q68DK2 2539 aa5.95□□□□□ -1.46
CD44-214ENST00000525211 EXPH5Q8NEV8 1989 aa5.95□□□□□ -1.46
CD44-214ENST00000525211 NPIPB9F8W1W9 429 aa5.95□□□□□ -1.46
CD44-214ENST00000525211 EIF1AYO14602 144 aaKnown RBP5.95□□□□□ -1.46
CD44-214ENST00000525211 MAST4O15021 2626 aa5.95□□□□□ -1.46
CD44-214ENST00000525211 ANGPT2O15123 496 aa5.95□□□□□ -1.46
CD44-214ENST00000525211 SLC22A2O15244 555 aa5.95□□□□□ -1.46
CD44-214ENST00000525211 DNAJA2O60884 412 aa5.95□□□□□ -1.46
CD44-214ENST00000525211 ADAM11O75078 769 aa5.95□□□□□ -1.46
CD44-214ENST00000525211 ICOSLGO75144 302 aa5.95□□□□□ -1.46
CD44-214ENST00000525211 COQ9O75208 318 aa5.95□□□□□ -1.46
CD44-214ENST00000525211 DCTN3O75935 186 aa5.95□□□□□ -1.46
CD44-214ENST00000525211 KCNH1O95259 989 aa5.95□□□□□ -1.46
CD44-214ENST00000525211 ANP32DO95626 131 aa5.95□□□□□ -1.46
CD44-214ENST00000525211 EPPINO95925 133 aa5.95□□□□□ -1.46
CD44-214ENST00000525211 PRB1P04280 392 aa5.95□□□□□ -1.46
CD44-214ENST00000525211 IFI6P09912 130 aa5.95□□□□□ -1.46
CD44-214ENST00000525211 ALOX5P09917 674 aa5.95□□□□□ -1.46
CD44-214ENST00000525211 TFPTP0C1Z6 253 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms