RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 SMAD9O15198 467 aaKnown RBP6.15□□□□□ -1.42
NEDD8-203ENST00000524927 DOK2O60496 412 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 UGT1A9O60656 530 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 CSF3P09919 207 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 KRT5P13647 590 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 MAGP20916 626 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 PTPN6P29350 595 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 BSGP35613 385 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 UGT2B10P36537 528 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 CD79BP40259 229 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 CD86P42081 329 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 ID2Q02363 134 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 RUNX2Q13950 521 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 DPYSQ14117 519 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 KIR2DS3Q14952 304 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 CA9Q16790 459 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 WASHC2DQ5SRD0 308 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 FAM205BPQ63HN1 556 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 TRNP1Q6NT89 227 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 PAPD4Q6PIY7 484 aaKnown RBP6.15□□□□□ -1.42
NEDD8-203ENST00000524927 TMEM220Q6QAJ8 160 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 ANKRD37Q7Z713 158 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 BBS5Q8N3I7 341 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 SLC25A41Q8N5S1 370 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 OR2L2Q8NH16 312 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 SIGLEC11Q96RL6 698 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 CCT8L2Q96SF2 557 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 ITPAQ9BY32 194 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 NUF2Q9BZD4 464 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 VN1R1Q9GZP7 353 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 CALHM2Q9HA72 323 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 HAUS2Q9NVX0 235 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 OR6C2Q9NZP2 312 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 KCNE2Q9Y6J6 123 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 COX11Q9Y6N1 276 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 FREM3P0C091 2139 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 DOCK7Q96N67 2140 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 TRBV5-7A0A0A0MS05 114 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 A0A1W2PP18 115 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 FEZF1A0PJY2 475 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 ARHGEF33A8MVX0 844 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 HNRNPCL1O60812 293 aaKnown RBP6.14□□□□□ -1.43
NEDD8-203ENST00000524927 PTP4A3O75365 173 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 TPSB2P20231 275 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 SLC26A5P58743 744 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 TPSAB1Q15661 275 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 CCNG2Q16589 344 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 SLC18B1Q6NT16 456 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 SUSD1Q6UWL2 747 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 IKBIPQ70UQ0 350 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 GPALPP1Q8IXQ4 340 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 PM20D2Q8IYS1 436 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 TMEM156Q8N614 296 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 CCDC185Q8N715 623 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 LRRC57Q8N9N7 239 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 GDAP1Q8TB36 358 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 DDB2Q92466 427 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 EME1Q96AY2 570 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 ZC3HAV1LQ96H79 300 aaKnown RBP6.14□□□□□ -1.43
NEDD8-203ENST00000524927 C10orf90Q96M02 699 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 SPATA13Q96N96 652 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 GSDMAQ96QA5 445 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 FAM173AQ9BQD7 235 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 TMEM184CQ9NVA4 438 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 A4GNTQ9UNA3 340 aa6.14□□□□□ -1.43
NEDD8-203ENST00000524927 SNRNP200O75643 2136 aaKnown RBP6.13□□□□□ -1.43
NEDD8-203ENST00000524927 A0A096LPK6 155 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 A0A0G2JMM0 328 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 A0A1W2PPB8 328 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 A0A1W2PRS3 328 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 OR2AG2A6NM03 316 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 KIR3DP1A8MWS1 328 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 C16orf97H3BN30 126 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 GTPBP1O00178 669 aaKnown RBP6.13□□□□□ -1.43
NEDD8-203ENST00000524927 SEC31AO94979 1220 aaKnown RBP6.13□□□□□ -1.43
NEDD8-203ENST00000524927 FTCDO95954 541 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 HSP90AA1P07900 732 aaKnown RBP6.13□□□□□ -1.43
NEDD8-203ENST00000524927 ANXA5P08758 320 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 CA4P22748 312 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 PBLDP30039 288 aaPredicted RBP6.13□□□□□ -1.43
NEDD8-203ENST00000524927 CCKARP32238 428 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 CD151P48509 253 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 MAXP61244 160 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 ACTN3Q08043 901 aaPredicted RBP6.13□□□□□ -1.43
NEDD8-203ENST00000524927 GGTLC2Q14390 218 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 TOMM20Q15388 145 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 MED22Q15528 200 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 RAB6CQ53S08 254 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 SFT2D3Q587I9 215 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 C6orf10Q5SRN2 563 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 LDLRAP1Q5SW96 308 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 ZNF550Q7Z398 422 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 SLFN11Q7Z7L1 901 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 SERPINA11Q86U17 422 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 GPSM1Q86YR5 675 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 PYROXD2Q8N2H3 581 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 ZNF525Q8N782 197 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 SNX31Q8N9S9 440 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 OR4N2Q8NGD1 307 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 NEIL3Q8TAT5 605 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms