RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 PTGDR2Q9Y5Y4 395 aa14.36□□□□□ -0.11
CLN8-205ENST00000520991 SPG11Q96JI7 2443 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 TLDC2A0PJX2 215 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 C17orf51A8MQB3 221 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 AZIN1O14977 448 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 PDPK1O15530 556 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 RCBTB2O95199 551 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 CHEK2O96017 543 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 NEFHP12036 1026 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 PRPH2P23942 346 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 CHMP24386 653 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 GPC1P35052 558 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 CPA2P48052 419 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 CLK3P49761 638 aaKnown RBP14.35□□□□□ -0.11
CLN8-205ENST00000520991 PSMD4P55036 377 aaKnown RBP14.35□□□□□ -0.11
CLN8-205ENST00000520991 SLC18A2Q05940 514 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 FOXF2Q12947 444 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 STX5Q13190 355 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 GAB1Q13480 694 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 PCLAFQ15004 111 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 GRAMD2AQ8IUY3 354 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.35□□□□□ -0.11
CLN8-205ENST00000520991 WNT2BQ93097 391 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 INTS12Q96CB8 462 aaKnown RBP14.35□□□□□ -0.11
CLN8-205ENST00000520991 RMND5BQ96G75 393 aaPredicted RBP14.35□□□□□ -0.11
CLN8-205ENST00000520991 EGLN2Q96KS0 407 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 TRMOQ9BU70 441 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 ACBD3Q9H3P7 528 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 DSN1Q9H410 356 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 ABCG2Q9UNQ0 655 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 CCL27Q9Y4X3 112 aa14.35□□□□□ -0.11
CLN8-205ENST00000520991 MED12Q93074 2177 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 DOCK7Q96N67 2140 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 ZIC3O60481 467 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 TRIM13O60858 407 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 PSMG1O95456 288 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 ZNF708P17019 499 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 IST1P53990 364 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 CLDN18P56856 261 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 RPL38P63173 70 aaKnown RBP14.34□□□□□ -0.11
CLN8-205ENST00000520991 SORDQ00796 357 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 KIAA0040Q15053 153 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 RAET1LQ5VY80 246 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 ANKRD26P1Q6NSI1 321 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 PLXDC2Q6UX71 529 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 CHMP1BQ7LBR1 199 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 ZNF551Q7Z340 670 aaPredicted RBP14.34□□□□□ -0.11
CLN8-205ENST00000520991 P4HA3Q7Z4N8 544 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 ADGRE4PQ86SQ3 457 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 LUZP2Q86TE4 346 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 GCNT2Q8N0V5 402 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 FADS6Q8N9I5 356 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 NINJ1Q92982 152 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 PPCDCQ96CD2 204 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 UCN2Q96RP3 112 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 CCT7Q99832 543 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 LMF2Q9BU23 707 aaKnown RBP14.34□□□□□ -0.11
CLN8-205ENST00000520991 G6PC3Q9BUM1 346 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 GATA5Q9BWX5 397 aaPredicted RBP14.34□□□□□ -0.11
CLN8-205ENST00000520991 RBM24Q9BX46 236 aaKnown RBP14.34□□□□□ -0.11
CLN8-205ENST00000520991 C3orf14Q9HBI5 128 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 EQTNQ9NQ60 294 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 FAM120CQ9NX05 1096 aaKnown RBP14.34□□□□□ -0.11
CLN8-205ENST00000520991 FLRT3Q9NZU0 649 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 JKAMPQ9P055 326 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 CLCF1Q9UBD9 225 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 EDARQ9UNE0 448 aa14.34□□□□□ -0.11
CLN8-205ENST00000520991 TTC36A6NLP5 189 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 B4DXG7 233 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 AKAP10O43572 662 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 FADS1O60427 444 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 KCNH1O95259 989 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 IL33O95760 270 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 LINC00032P0C843 101 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 HK1P19367 917 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 GABRA3P34903 492 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 GANABQ14697 944 aaKnown RBP14.33□□□□□ -0.12
CLN8-205ENST00000520991 BCL2A1Q16548 175 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 SZRD1Q7Z422 152 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 DDIASQ8IXT1 998 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 UBQLNLQ8IYU4 475 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 MEIOBQ8N635 442 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 OR2M3Q8NG83 312 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 OR2W6PQ8NHA6 318 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 ZFP28Q8NHY6 868 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 LINC01560Q8TB33 94 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 CIDECQ96AQ7 238 aaPredicted RBP14.33□□□□□ -0.12
CLN8-205ENST00000520991 APOPT1Q96IL0 206 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 TSSK3Q96PN8 268 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 TBL1XR1Q9BZK7 514 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 REEP4Q9H6H4 257 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 PTGES2Q9H7Z7 377 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 L2HGDHQ9H9P8 463 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 MED11Q9P086 117 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 SH3BP4Q9P0V3 963 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 ST6GALNAC2Q9UJ37 374 aa14.33□□□□□ -0.12
CLN8-205ENST00000520991 FAM221AA4D161 298 aa14.32□□□□□ -0.12
CLN8-205ENST00000520991 NPIPB8E9PQR5 432 aa14.32□□□□□ -0.12
CLN8-205ENST00000520991 IFI6P09912 130 aa14.32□□□□□ -0.12
CLN8-205ENST00000520991 EPXP11678 715 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms