RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 ADAD1Q96M93 576 aaKnown RBP10.65□□□□□ -0.7
TCOF1-211ENST00000513346 PRRG4Q9BZD6 226 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 B3GNT4Q9C0J1 378 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 RETREG1Q9H6L5 497 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 MED31Q9Y3C7 131 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 TPRP12270 2363 aaKnown RBP10.65□□□□□ -0.7
TCOF1-211ENST00000513346 MAST2Q6P0Q8 1798 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 A0A1B0GVC2 190 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 A6NIN4 97 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 SLC22A31A6NKX4 558 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 ERI3O43414 337 aaKnown RBP10.65□□□□□ -0.7
TCOF1-211ENST00000513346 RAF1P04049 648 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 SBK3P0C264 359 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 MPC1LP0DKB6 136 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 ARNTP27540 789 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 PRKXP51817 358 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 C1orf189Q5VU69 101 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 C6orf120Q7Z4R8 191 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 TCTE3Q8IZS6 198 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 SVBPQ8N300 66 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 ZNF680Q8NEM1 530 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 NT5C3BQ969T7 300 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 TMEM19Q96HH6 336 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 RGCCQ9H4X1 137 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 MKKSQ9NPJ1 570 aaPredicted RBP10.65□□□□□ -0.7
TCOF1-211ENST00000513346 ASF1BQ9NVP2 202 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 COPS7AQ9UBW8 275 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 COPS3Q9UNS2 423 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 RASD1Q9Y272 281 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 TMEM5Q9Y2B1 443 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 E7EQ34 232 aa10.65□□□□□ -0.71
TCOF1-211ENST00000513346 GOSR2O14653 212 aa10.65□□□□□ -0.71
TCOF1-211ENST00000513346 ACRV1P26436 265 aa10.65□□□□□ -0.71
TCOF1-211ENST00000513346 GABRA5P31644 462 aa10.65□□□□□ -0.71
TCOF1-211ENST00000513346 GRK6P43250 576 aa10.65□□□□□ -0.71
TCOF1-211ENST00000513346 ZNF805Q5CZA5 627 aa10.65□□□□□ -0.71
TCOF1-211ENST00000513346 TOR1AIP1Q5JTV8 583 aa10.65□□□□□ -0.71
TCOF1-211ENST00000513346 CD276Q5ZPR3 534 aa10.65□□□□□ -0.71
TCOF1-211ENST00000513346 OR56A1Q8NGH5 318 aa10.65□□□□□ -0.71
TCOF1-211ENST00000513346 SNIP1Q8TAD8 396 aaKnown RBP10.65□□□□□ -0.71
TCOF1-211ENST00000513346 CD300LFQ8TDQ1 290 aa10.65□□□□□ -0.71
TCOF1-211ENST00000513346 ADAMTS14Q8WXS8 1223 aa10.65□□□□□ -0.71
TCOF1-211ENST00000513346 SORCS1Q8WY21 1168 aa10.65□□□□□ -0.71
TCOF1-211ENST00000513346 ZNF354BQ96LW1 612 aa10.65□□□□□ -0.71
TCOF1-211ENST00000513346 CXCL16Q9H2A7 254 aa10.65□□□□□ -0.71
TCOF1-211ENST00000513346 UTS2RQ9UKP6 389 aa10.65□□□□□ -0.71
TCOF1-211ENST00000513346 FARSAQ9Y285 508 aaKnown RBP10.65□□□□□ -0.71
TCOF1-211ENST00000513346 MARF1Q9Y4F3 1742 aaKnown RBP10.64□□□□□ -0.71
TCOF1-211ENST00000513346 M0QZQ0 153 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 GMFGO60234 142 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 B3GALNT1O75752 331 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 UBXN7O94888 489 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 WDPCPO95876 746 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 CLEC2LP0C7M8 214 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 NDUFV2P19404 249 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 RBMS1P29558 406 aaKnown RBP10.64□□□□□ -0.71
TCOF1-211ENST00000513346 CTSOP43234 321 aaPredicted RBP10.64□□□□□ -0.71
TCOF1-211ENST00000513346 ARRB1P49407 418 aaPredicted RBP10.64□□□□□ -0.71
TCOF1-211ENST00000513346 TMEM115Q12893 351 aaPredicted RBP10.64□□□□□ -0.71
TCOF1-211ENST00000513346 ERN2Q76MJ5 926 aaKnown RBP10.64□□□□□ -0.71
TCOF1-211ENST00000513346 SCD5Q86SK9 330 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 SLC5A11Q8WWX8 675 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 KHSRPQ92945 711 aaKnown RBP eCLIP10.64□□□□□ -0.71
TCOF1-211ENST00000513346 SCGB3A2Q96PL1 93 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 TTTY10Q9BZA0 68 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 SCN7AQ01118 1682 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 HEPACAM2A8MVW5 462 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 ANHXE9PGG2 379 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 LCMT2O60294 686 aaKnown RBP10.64□□□□□ -0.71
TCOF1-211ENST00000513346 ADH1BP00325 375 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 MT-ND4P03905 459 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 HTR1AP08908 422 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 UCHL1P09936 223 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 NFYAP23511 347 aaPredicted RBP10.64□□□□□ -0.71
TCOF1-211ENST00000513346 PTBP1P26599 531 aaKnown RBP eCLIP10.64□□□□□ -0.71
TCOF1-211ENST00000513346 OR3A2P47893 321 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 CLLU1OSQ5K130 101 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 NKAPLQ5M9Q1 402 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 KLHL24Q6TFL4 600 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 SLC51BQ86UW2 128 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 C12orf45Q8N5I9 185 aaPredicted RBP10.64□□□□□ -0.71
TCOF1-211ENST00000513346 KCT2Q8NC54 265 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 OR10H5Q8NGA6 315 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 FANK1Q8TC84 345 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 SMARCD2Q92925 531 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 EGLN2Q96KS0 407 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 YARS2Q9Y2Z4 477 aaKnown RBP10.64□□□□□ -0.71
TCOF1-211ENST00000513346 HRH3Q9Y5N1 445 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 TARM1B6A8C7 271 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 TGM5O43548 720 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 SSX5O60225 188 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 TCRBP04435 133 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 PPP3CBP16298 524 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 IL1RNP18510 177 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 PREPP48147 710 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 ART1P52961 327 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 RPS26P62854 115 aaKnown RBP10.64□□□□□ -0.71
TCOF1-211ENST00000513346 FLI1Q01543 452 aaPredicted RBP10.64□□□□□ -0.71
TCOF1-211ENST00000513346 UGT3A2Q3SY77 523 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 TCTE1Q5JU00 501 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms