RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 PAFAH2Q99487 392 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 EBPLQ9BY08 206 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 RAB17Q9H0T7 212 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 AHSPQ9NZD4 102 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 VPS29Q9UBQ0 182 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 PRODH2Q9UF12 536 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 MCM8Q9UJA3 840 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 DKKL1Q9UK85 242 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 TRIM49D1C9J1S8 452 aa12.02□□□□□ -0.49
DDX41-210ENST00000509576 DLX3O60479 287 aa12.02□□□□□ -0.49
DDX41-210ENST00000509576 PLOD3O60568 738 aa12.02□□□□□ -0.49
DDX41-210ENST00000509576 SMPD2O60906 423 aa12.02□□□□□ -0.49
DDX41-210ENST00000509576 PNLIPRP2P54317 469 aa12.02□□□□□ -0.49
DDX41-210ENST00000509576 FOXA1P55317 472 aa12.02□□□□□ -0.49
DDX41-210ENST00000509576 TRA2BP62995 288 aaKnown RBP12.02□□□□□ -0.49
DDX41-210ENST00000509576 CLCQ05315 142 aa12.02□□□□□ -0.49
DDX41-210ENST00000509576 C10orf62Q5T681 223 aaPredicted RBP12.02□□□□□ -0.49
DDX41-210ENST00000509576 AAGABQ6PD74 315 aa12.02□□□□□ -0.49
DDX41-210ENST00000509576 SCIMPQ6UWF3 145 aa12.02□□□□□ -0.49
DDX41-210ENST00000509576 RELL1Q8IUW5 271 aa12.02□□□□□ -0.49
DDX41-210ENST00000509576 UHMK1Q8TAS1 419 aaKnown RBP12.02□□□□□ -0.49
DDX41-210ENST00000509576 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.02□□□□□ -0.49
DDX41-210ENST00000509576 NUDT8Q8WV74 236 aa12.02□□□□□ -0.49
DDX41-210ENST00000509576 TMCO6Q96DC7 493 aa12.02□□□□□ -0.49
DDX41-210ENST00000509576 FAM111AQ96PZ2 611 aa12.02□□□□□ -0.49
DDX41-210ENST00000509576 PINK1Q9BXM7 581 aa12.02□□□□□ -0.49
DDX41-210ENST00000509576 TNFRSF12AQ9NP84 129 aa12.02□□□□□ -0.49
DDX41-210ENST00000509576 SLC35C2Q9NQQ7 365 aa12.02□□□□□ -0.49
DDX41-210ENST00000509576 TMEM216Q9P0N5 145 aa12.02□□□□□ -0.49
DDX41-210ENST00000509576 DMGDHQ9UI17 866 aaKnown RBP12.02□□□□□ -0.49
DDX41-210ENST00000509576 EIF3LQ9Y262 564 aaKnown RBP12.02□□□□□ -0.49
DDX41-210ENST00000509576 TIMM22Q9Y584 194 aa12.02□□□□□ -0.49
DDX41-210ENST00000509576 ZNF780BQ9Y6R6 833 aa12.02□□□□□ -0.49
DDX41-210ENST00000509576 STAB1Q9NY15 2570 aa12.02□□□□□ -0.49
DDX41-210ENST00000509576 MYO1GB0I1T2 1018 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 UBFD1O14562 309 aaKnown RBP12.01□□□□□ -0.49
DDX41-210ENST00000509576 SEC14L5O43304 696 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 EMC8O43402 210 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 PCDH7O60245 1069 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 ABCB7O75027 752 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 OTCP00480 354 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 CRHP06850 196 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 PTH2RP49190 550 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 DIO3P55073 304 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 DSCR4P56555 118 aaPredicted RBP12.01□□□□□ -0.49
DDX41-210ENST00000509576 STX5Q13190 355 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 PON3Q15166 354 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.01□□□□□ -0.49
DDX41-210ENST00000509576 CTU2Q2VPK5 515 aaKnown RBP12.01□□□□□ -0.49
DDX41-210ENST00000509576 ZNF678Q5SXM1 525 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 PRSS57Q6UWY2 283 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 SYT10Q6XYQ8 523 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 MARCH3Q86UD3 253 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 P3H2Q8IVL5 708 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 MTBPQ96DY7 904 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 CCL19Q99731 98 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 MRPL57Q9BQC6 102 aaKnown RBP12.01□□□□□ -0.49
DDX41-210ENST00000509576 MED18Q9BUE0 208 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 MRPL46Q9H2W6 279 aaKnown RBP12.01□□□□□ -0.49
DDX41-210ENST00000509576 ACBD3Q9H3P7 528 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 NDRG3Q9UGV2 375 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 CLEC4AQ9UMR7 237 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 ALPK2Q86TB3 2170 aa12.01□□□□□ -0.49
DDX41-210ENST00000509576 SVEP1Q4LDE5 3571 aa12□□□□□ -0.49
DDX41-210ENST00000509576 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12□□□□□ -0.49
DDX41-210ENST00000509576 GXYLT2A0PJZ3 443 aa12□□□□□ -0.49
DDX41-210ENST00000509576 H3BML4 177 aa12□□□□□ -0.49
DDX41-210ENST00000509576 UPK1AO00322 258 aa12□□□□□ -0.49
DDX41-210ENST00000509576 CASKO14936 926 aa12□□□□□ -0.49
DDX41-210ENST00000509576 SMIM24O75264 130 aa12□□□□□ -0.49
DDX41-210ENST00000509576 GUCY1B2O75343 617 aa12□□□□□ -0.49
DDX41-210ENST00000509576 TNFRSF21O75509 655 aa12□□□□□ -0.49
DDX41-210ENST00000509576 SOX30O94993 753 aa12□□□□□ -0.49
DDX41-210ENST00000509576 JUNP05412 331 aaKnown RBP12□□□□□ -0.49
DDX41-210ENST00000509576 CD8BP10966 210 aa12□□□□□ -0.49
DDX41-210ENST00000509576 PEPDP12955 493 aa12□□□□□ -0.49
DDX41-210ENST00000509576 POU2F1P14859 743 aa12□□□□□ -0.49
DDX41-210ENST00000509576 HK1P19367 917 aa12□□□□□ -0.49
DDX41-210ENST00000509576 IL12BP29460 328 aa12□□□□□ -0.49
DDX41-210ENST00000509576 TIA1P31483 386 aaKnown RBP eCLIP12□□□□□ -0.49
DDX41-210ENST00000509576 NR1H2P55055 460 aa12□□□□□ -0.49
DDX41-210ENST00000509576 ZNF844Q08AG5 666 aa12□□□□□ -0.49
DDX41-210ENST00000509576 EFR3AQ14156 821 aa12□□□□□ -0.49
DDX41-210ENST00000509576 RAET1LQ5VY80 246 aa12□□□□□ -0.49
DDX41-210ENST00000509576 GALNT18Q6P9A2 607 aa12□□□□□ -0.49
DDX41-210ENST00000509576 P4HA3Q7Z4N8 544 aa12□□□□□ -0.49
DDX41-210ENST00000509576 ZAR1Q86SH2 424 aa12□□□□□ -0.49
DDX41-210ENST00000509576 ATG4DQ86TL0 474 aaPredicted RBP12□□□□□ -0.49
DDX41-210ENST00000509576 METTL25Q8N6Q8 603 aa12□□□□□ -0.49
DDX41-210ENST00000509576 OR4K17Q8NGC6 315 aa12□□□□□ -0.49
DDX41-210ENST00000509576 PIGTQ969N2 578 aa12□□□□□ -0.49
DDX41-210ENST00000509576 ERP27Q96DN0 273 aa12□□□□□ -0.49
DDX41-210ENST00000509576 C1GALT1C1Q96EU7 318 aa12□□□□□ -0.49
DDX41-210ENST00000509576 ADGRG7Q96K78 797 aa12□□□□□ -0.49
DDX41-210ENST00000509576 ZNF382Q96SR6 550 aa12□□□□□ -0.49
DDX41-210ENST00000509576 FAIM2Q9BWQ8 316 aa12□□□□□ -0.49
DDX41-210ENST00000509576 GSX2Q9BZM3 304 aa12□□□□□ -0.49
DDX41-210ENST00000509576 GLIPR2Q9H4G4 154 aa12□□□□□ -0.49
DDX41-210ENST00000509576 PPP4R1LQ9P1A2 415 aa12□□□□□ -0.49
DDX41-210ENST00000509576 TMCO1Q9UM00 188 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms