RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 OR10Q1Q8NGQ4 319 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 SPATA22Q8NHS9 363 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 B4GALNT2Q8NHY0 566 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 OIT3Q8WWZ8 545 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 ELMO1Q92556 727 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 KAT2AQ92830 837 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 RBMXL1Q96E39 390 aaKnown RBP3.59□□□□□ -1.83
USP54-217ENST00000498213 DTNBP1Q96EV8 351 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 OXNAD1Q96HP4 312 aaPredicted RBP3.59□□□□□ -1.83
USP54-217ENST00000498213 IMMP1LQ96LU5 166 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 NAP1L5Q96NT1 182 aaPredicted RBP3.59□□□□□ -1.83
USP54-217ENST00000498213 LPAR4Q99677 370 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 TBL1YQ9BQ87 522 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 UTP23Q9BRU9 249 aaKnown RBP3.59□□□□□ -1.83
USP54-217ENST00000498213 IL22Q9GZX6 179 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 DRC3Q9H069 523 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 TP63Q9H3D4 680 aaPredicted RBP3.59□□□□□ -1.83
USP54-217ENST00000498213 UGT1A10Q9HAW8 530 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 FAM60AQ9NP50 221 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 BPIFA1Q9NP55 256 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 SPAG4Q9NPE6 437 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 EIF2B3Q9NR50 452 aaKnown RBP3.59□□□□□ -1.83
USP54-217ENST00000498213 SLC22A11Q9NSA0 550 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 HOMER3Q9NSC5 361 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 SIRT3Q9NTG7 399 aaPredicted RBP3.59□□□□□ -1.83
USP54-217ENST00000498213 LIN7CQ9NUP9 197 aaKnown RBP3.59□□□□□ -1.83
USP54-217ENST00000498213 SPHK1Q9NYA1 384 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 B4GALT7Q9UBV7 327 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 TRIM10Q9UDY6 481 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 GNPTGQ9UJJ9 305 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 PPIEQ9UNP9 301 aaKnown RBP3.59□□□□□ -1.83
USP54-217ENST00000498213 KLF13Q9Y2Y9 288 aaPredicted RBP3.59□□□□□ -1.83
USP54-217ENST00000498213 LRP12Q9Y561 859 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 ALG6Q9Y672 507 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 ARL5AQ9Y689 179 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 SLC22A7Q9Y694 548 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 HYDINQ4G0P3 5121 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 HCFC1P51610 2035 aa3.59□□□□□ -1.83
USP54-217ENST00000498213 RYR1P21817 5038 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 USP27XA6NNY8 438 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 MAGEB17A8MXT2 336 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 BCKDKO14874 412 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 CDH16O75309 829 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 SLC4A1P02730 911 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 CATP04040 527 aaKnown RBP3.58□□□□□ -1.84
USP54-217ENST00000498213 GYPCP04921 128 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 HEXBP07686 556 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 UQCRHP07919 91 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 PIRTP0C851 137 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 SKILP12757 684 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 MAGP20916 626 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 MSNP26038 577 aaKnown RBP3.58□□□□□ -1.84
USP54-217ENST00000498213 ARRB2P32121 409 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 FOXN2P32314 431 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 SKIV2L2P42285 1042 aaKnown RBP3.58□□□□□ -1.84
USP54-217ENST00000498213 PCP4P48539 62 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 CYB561P49447 251 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 RWDD2BP57060 319 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 NUP107P57740 925 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 RPS15AP62244 130 aaKnown RBP3.58□□□□□ -1.84
USP54-217ENST00000498213 PRAMEP78395 509 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 SARNPP82979 210 aaKnown RBP3.58□□□□□ -1.84
USP54-217ENST00000498213 RCN2Q14257 317 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 MESDQ14696 234 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 RPS6KA2Q15349 733 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 ZIC1Q15915 447 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 BTBD16Q32M84 506 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 SLC25A35Q3KQZ1 300 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 FASTKD1Q53R41 847 aaKnown RBP3.58□□□□□ -1.84
USP54-217ENST00000498213 ZNF766Q5HY98 468 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 ACER2Q5QJU3 275 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 NDUFAF5Q5TEU4 345 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 C1orf189Q5VU69 101 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 MFSD7Q6UXD7 560 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 IL17RELQ6ZVW7 336 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 COX15Q7KZN9 410 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 TAS2R42Q7RTR8 314 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 OTOAQ7RTW8 1153 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 SDCCAG8Q86SQ7 713 aaPredicted RBP3.58□□□□□ -1.84
USP54-217ENST00000498213 CHERPQ8IWX8 916 aaKnown RBP3.58□□□□□ -1.84
USP54-217ENST00000498213 SLC25A41Q8N5S1 370 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 IQCF1Q8N6M8 205 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 UBL4BQ8N7F7 174 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 ARIH2OSQ8N7S6 290 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 SPC24Q8NBT2 197 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 CAMKVQ8NCB2 501 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 MDS2Q8NDY4 140 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 OR5AR1Q8NGP9 310 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 OR2A1Q8NGT9 310 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 OR4L1Q8NH43 312 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 OR8K3Q8NH51 312 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 CREB3L4Q8TEY5 395 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 FAM222BQ8WU58 562 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 MED30Q96HR3 178 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 TMEM41AQ96HV5 264 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 SGCZQ96LD1 299 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 SMIM14Q96QK8 99 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 OR2A5Q96R48 311 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 HGH1Q9BTY7 390 aa3.58□□□□□ -1.84
USP54-217ENST00000498213 SORBS1Q9BX66 1292 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms