RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 ITGB7P26010 798 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 PSMB10P40306 273 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 PBX2P40425 430 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 SYT14P1Q58G82 188 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 OR5M3Q8NGP4 307 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 ZMYND19Q96E35 227 aaPredicted RBP12.63□□□□□ -0.39
GPC1-209ENST00000495100 SIPA1Q96FS4 1042 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 FN3KQ9H479 309 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 BRD7Q9NPI1 651 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 TXNL4BQ9NX01 149 aaKnown RBP12.63□□□□□ -0.39
GPC1-209ENST00000495100 MYEF2Q9P2K5 600 aaKnown RBP12.63□□□□□ -0.39
GPC1-209ENST00000495100 EXTL2Q9UBQ6 330 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 FBXL4Q9UKA2 621 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 NLRC5Q86WI3 1866 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 RAB36O95755 333 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 HLA-DQA2P01906 255 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 HIST1H1TP22492 207 aaPredicted RBP12.63□□□□□ -0.39
GPC1-209ENST00000495100 IGFBP4P22692 258 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 MYL9P24844 172 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 CMPK1P30085 196 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 TRIM23P36406 574 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 CLDN12P56749 244 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 SMIM11AP58511 58 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 RUNX3Q13761 415 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 SMU1Q2TAY7 513 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 ENTPD8Q5MY95 495 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 IRAK1BP1Q5VVH5 260 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 TMEM64Q6YI46 380 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 DNAJC5GQ8N7S2 189 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 OR52I1Q8NGK6 324 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 SMARCD2Q92925 531 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 RERGQ96A58 199 aaPredicted RBP12.63□□□□□ -0.39
GPC1-209ENST00000495100 CRELD1Q96HD1 420 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 OR7D2Q96RA2 312 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 GAL3ST4Q96RP7 486 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 SPATA5L1Q9BVQ7 753 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 SOHLH2Q9NX45 425 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 HCN2Q9UL51 889 aa12.63□□□□□ -0.39
GPC1-209ENST00000495100 LOC105369274A0A096LPK9 316 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 FAAHO00519 579 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 EML2O95834 649 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 SOD1P00441 154 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 ADAP00813 363 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 HOXB2P14652 356 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 BSGP35613 385 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 PRDX1Q06830 199 aaKnown RBP12.62□□□□□ -0.39
GPC1-209ENST00000495100 IRF3Q14653 427 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 AGERQ15109 404 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 FXNQ16595 210 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 FBXO43Q4G163 708 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 PRPF38BQ5VTL8 546 aaKnown RBP12.62□□□□□ -0.39
GPC1-209ENST00000495100 ARMC6Q6NXE6 501 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 BHLHB9Q6PI77 547 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 PHC2Q8IXK0 858 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 PEX5LQ8IYB4 626 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 OR4N4Q8N0Y3 316 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 OR5K2Q8NHB8 316 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 FAM174AQ8TBP5 190 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 SLC17A9Q9BYT1 436 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 C11orf54Q9H0W9 315 aaPredicted RBP12.62□□□□□ -0.39
GPC1-209ENST00000495100 OR52A5Q9H2C5 316 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 ANKMY1Q9P2S6 941 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 RPS6KB2Q9UBS0 482 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 ABCA7Q8IZY2 2146 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 CNOT1A5YKK6 2376 aaKnown RBP12.62□□□□□ -0.39
GPC1-209ENST00000495100 CENPVL1A0A0U1RR11 272 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 SGK494L7N484 410 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 NOS1APO75052 506 aaPredicted RBP12.62□□□□□ -0.39
GPC1-209ENST00000495100 SYPP08247 313 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 TLX1P31314 330 aaPredicted RBP12.62□□□□□ -0.39
GPC1-209ENST00000495100 RGS1Q08116 209 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 PFN4Q8NHR9 129 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 OTUB2Q96DC9 234 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 ISG20L2Q9H9L3 353 aaKnown RBP12.62□□□□□ -0.39
GPC1-209ENST00000495100 MAU2Q9Y6X3 613 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 HSPE1-MOB4S4R3N1 261 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 GPR179Q6PRD1 2367 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 MEIOCA2RUB1 952 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 CDC14CA4D256 554 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 MEN1O00255 615 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 DYRK3O43781 588 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 RNGTTO60942 597 aaKnown RBP12.62□□□□□ -0.39
GPC1-209ENST00000495100 DNAJB5O75953 348 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 ANXA11P50995 505 aaKnown RBP12.62□□□□□ -0.39
GPC1-209ENST00000495100 MAT1AQ00266 395 aaKnown RBP12.62□□□□□ -0.39
GPC1-209ENST00000495100 ZNF45Q02386 682 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 STX4Q12846 297 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 SQSTM1Q13501 440 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 ANGPT1Q15389 498 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 TP53I3Q53FA7 332 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 CCDC157Q569K6 752 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 CEP78Q5JTW2 689 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 ZNF582Q96NG8 517 aaPredicted RBP12.62□□□□□ -0.39
GPC1-209ENST00000495100 BARHL1Q9BZE3 327 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 RETREG1Q9H6L5 497 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 NANSQ9NR45 359 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 TBC1D29Q9UFV1 150 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 STUB1Q9UNE7 303 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 SNX7Q9UNH6 387 aa12.62□□□□□ -0.39
GPC1-209ENST00000495100 SLC27A6Q9Y2P4 619 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms