RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 PILRAQ9UKJ1 303 aa12.91□□□□□ -0.34
VCP-207ENST00000493886 POLHQ9Y253 713 aa12.91□□□□□ -0.34
VCP-207ENST00000493886 FAAHO00519 579 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 CHMP24386 653 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 SOX3P41225 446 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 TGM4P49221 684 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 CCR5P51681 352 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 CRISP1P54107 249 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 POLR2GP62487 172 aaKnown RBP eCLIP12.9□□□□□ -0.34
VCP-207ENST00000493886 TEKQ02763 1124 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 ZNF542PQ5EBM4 170 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 SNAP47Q5SQN1 464 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 FRMPD2BQ6IN97 320 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 PTCHD4Q6ZW05 846 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 GLRX5Q86SX6 157 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 SFTPA2Q8IWL1 248 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 SERINC2Q96SA4 455 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 DNAJC27Q9NZQ0 273 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 KCMF1Q9P0J7 381 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 PHF11Q9UIL8 331 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 A4GNTQ9UNA3 340 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 SLC9A8Q9Y2E8 581 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 LOC105369274A0A096LPK9 316 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 LOC102723532A0A0G2JNH3 316 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 A0A0G2JPF8 293 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 URADA6NGE7 173 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 HNRNPCL2B2RXH8 293 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 HNRNPCL3B7ZW38 293 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 RGS5O15539 181 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 OR10H3O60404 316 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 CELA2BP08218 269 aaPredicted RBP12.9□□□□□ -0.34
VCP-207ENST00000493886 HNRNPCL4P0DMR1 293 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 AZGP1P25311 298 aaKnown RBP12.9□□□□□ -0.34
VCP-207ENST00000493886 SMIM11AP58511 58 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 CDC42P60953 191 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 PIN1Q13526 163 aaPredicted RBP12.9□□□□□ -0.34
VCP-207ENST00000493886 C21orf62-AS1Q17RA5 79 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 CLVS2Q5SYC1 327 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 WDR53Q7Z5U6 358 aaPredicted RBP12.9□□□□□ -0.34
VCP-207ENST00000493886 OR4N4Q8N0Y3 316 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 EFHD2Q96C19 240 aaPredicted RBP12.9□□□□□ -0.34
VCP-207ENST00000493886 MGAT4BQ9UQ53 548 aa12.9□□□□□ -0.34
VCP-207ENST00000493886 ZAR1LA6NP61 321 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 EPPINO95925 133 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 IGLV3-19P01714 112 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 IGFBP4P22692 258 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 UBE2IP63279 158 aaKnown RBP12.89□□□□□ -0.35
VCP-207ENST00000493886 RUNX2Q13950 521 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 PRAMEF8Q5VWM4 474 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 PRAMEF7Q5VXH5 474 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 LINC00299Q6ZSB3 139 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 AKAP14Q86UN6 197 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 CAMKVQ8NCB2 501 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 KBTBD8Q8NFY9 601 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 MGLLQ99685 303 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 ZFYVE21Q9BQ24 234 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 UCK2Q9BZX2 261 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 EVA1BQ9NVM1 165 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 DSPPQ9NZW4 1301 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 ENTPD2Q9Y5L3 495 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 PNMA8CA0A1B0GUJ8 204 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 C2orf74A8MZ97 194 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 B3GALT2O43825 422 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 UGT2B17O75795 530 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 LGI1O95970 557 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 PVRP15151 417 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 LSSP48449 732 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 MAN2A2P49641 1150 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 P2RX3P56373 397 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 LRRC25Q8N386 305 aaPredicted RBP12.89□□□□□ -0.35
VCP-207ENST00000493886 SLC7A13Q8TCU3 470 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 SLC37A2Q8TED4 501 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 FUZQ9BT04 418 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 GPR174Q9BXC1 333 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 NUAK2Q9H093 628 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 QRSL1Q9H0R6 528 aaKnown RBP12.89□□□□□ -0.35
VCP-207ENST00000493886 DAPP1Q9UN19 280 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 WWP2O00308 870 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 ASNA1O43681 348 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 TPST2O60704 377 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 DNAJB6O75190 326 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 NME6O75414 186 aaPredicted RBP12.89□□□□□ -0.35
VCP-207ENST00000493886 OSMP13725 252 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 XKP51811 444 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 UGT2B15P54855 530 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 FAM92BQ6ZTR7 304 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 ABHD13Q7L211 337 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 TAF8Q7Z7C8 310 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 OR6T1Q8NGN1 323 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 COL26A1Q96A83 441 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 MSANTD3Q96H12 275 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 CNPPD1Q9BV87 410 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 PINK1Q9BXM7 581 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 ACTRT3Q9BYD9 372 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 HRASLS2Q9NWW9 162 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 REV1Q9UBZ9 1251 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 KCNN3Q9UGI6 736 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 CLEC2DQ9UHP7 191 aa12.89□□□□□ -0.35
VCP-207ENST00000493886 KIR2DS5A0A0G2JLQ3 304 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 A0A0G2JNG1 304 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms