RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 LAS2Q8IYD9 372 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 TMEM132CQ8N3T6 1108 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 ZNF843Q8N446 348 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 LIX1Q8N485 282 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 ZNF540Q8NDQ6 660 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 OR7G3Q8NG95 312 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 PEX11GQ96HA9 241 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 QRFPRQ96P65 431 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 F2RL3Q96RI0 385 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 RBCK1Q9BYM8 510 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 GABARAPL1Q9H0R8 117 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 RIBC2Q9H4K1 309 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 SP140LQ9H930 580 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 ZNF71Q9NQZ8 489 aaPredicted RBP8.78□□□□□ -1
BRCA1-219ENST00000491747 SEMA3GQ9NS98 782 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 C1orf109Q9NX04 203 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 ASIC5Q9NY37 505 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 PCDHB14Q9Y5E9 798 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 GMPPBQ9Y5P6 360 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 A6NL46 340 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 CHST10O43529 356 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 SH3BGRLO75368 114 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 SEC22BO75396 215 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 MYO1DO94832 1006 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 PIK3CGP48736 1102 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 EMP2P54851 167 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 BTN3A2P78410 334 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 Q0VFX4 171 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 RUNX2Q13950 521 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 DCAF10Q5QP82 559 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 DEPDC1Q5TB30 811 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 MED27Q6P2C8 311 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 MED25Q71SY5 747 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 ABHD13Q7L211 337 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 TRIM46Q7Z4K8 759 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 UBE3DQ7Z6J8 389 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 GALNT5Q7Z7M9 940 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 SLC22A16Q86VW1 577 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 SNX29P2Q8IUI4 249 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 LACC1Q8IV20 430 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 TTLQ8NG68 377 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 OR11G2Q8NGC1 345 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 RHOXF1Q8NHV9 184 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 LGALS12Q96DT0 336 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 VN1R1Q9GZP7 353 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 SLIRPQ9GZT3 109 aaKnown RBP8.77□□□□□ -1.01
BRCA1-219ENST00000491747 DSN1Q9H410 356 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 LRTM1Q9HBL6 345 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 LANCL2Q9NS86 450 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 C14orf105Q9NVL8 296 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 FBXL4Q9UKA2 621 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 MKL2Q9ULH7 1088 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 TP53TG5Q9Y2B4 290 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 TRBV5-3A0A0A0MS03 114 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 SAGE2PA6NJ88 616 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 CLDN24A6NM45 220 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 FAM227AF5H4B4 570 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 ERI3O43414 337 aaKnown RBP8.77□□□□□ -1.01
BRCA1-219ENST00000491747 CDC123O75794 336 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-219ENST00000491747 CEACAM4O75871 244 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 FADS2O95864 444 aaKnown RBP8.77□□□□□ -1.01
BRCA1-219ENST00000491747 TGFB1P01137 390 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 HEXBP07686 556 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 MAP2K4P45985 399 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 NCS1P62166 190 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 TUBA1BP68363 451 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 HMGCS1Q01581 520 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 IL1RL1Q01638 556 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 FADDQ13158 208 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 LRIF1Q5T3J3 769 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 LIPJQ5W064 366 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 TMEM236Q5W0B7 351 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 HIST2H2AA3Q6FI13 130 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 METTL2BQ6P1Q9 378 aaKnown RBP8.77□□□□□ -1.01
BRCA1-219ENST00000491747 TUBA1AQ71U36 451 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 PAGE2Q7Z2X7 111 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 TSPYL5Q86VY4 417 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-219ENST00000491747 CYP4Z1Q86W10 505 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 CALHM3Q86XJ0 350 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 ARMC8Q8IUR7 673 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 FAM9CQ8IZT9 166 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 CA13Q8N1Q1 262 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 L3MBTL4Q8NA19 623 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 FDCSPQ8NFU4 85 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 IPCEF1Q8WWN9 437 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-219ENST00000491747 GAL3ST3Q96A11 431 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 ZHX1-C8orf76Q96EF9 292 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 NUDT9Q9BW91 350 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 MS4A8Q9BY19 250 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 SLC25A18Q9H1K4 315 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 ACOT13Q9NPJ3 140 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 PRDM7Q9NQW5 492 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 TUBD1Q9UJT1 453 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 PMF1-BGLAPU3KQ54 211 aa8.77□□□□□ -1.01
BRCA1-219ENST00000491747 A0A096LPI6 279 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 PEX12O00623 359 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 MITFO75030 526 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-219ENST00000491747 FAM20BO75063 409 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 IGHEP01854 428 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 GSNP06396 782 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms