RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 BNIPLQ7Z465 357 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 SYVN1Q86TM6 617 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 VASH2Q86V25 355 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 ABCA7Q8IZY2 2146 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 FBXL16Q8N461 479 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 COLGALT1Q8NBJ5 622 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 VN1R17PQ8TDU5 208 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 NTNG2Q96CW9 530 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 C14orf79Q96F83 325 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 FAM173AQ9BQD7 235 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 TTYH2Q9BSA4 534 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 ST6GALNAC5Q9BVH7 336 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 GPR174Q9BXC1 333 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 CCSER1Q9C0I3 900 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 NACA2Q9H009 215 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 GORASP2Q9H8Y8 452 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 LRRC40Q9H9A6 602 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 KCNMB3Q9NPA1 279 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 NRN1Q9NPD7 142 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 HOMER3Q9NSC5 361 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 PRR34Q9NV39 138 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 ZMAT5Q9UDW3 170 aaKnown RBP3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 TRIM10Q9UDY6 481 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 MLXQ9UH92 298 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 NUDCQ9Y266 331 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 DDX49Q9Y6V7 483 aaKnown RBP3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 DHX29Q7Z478 1369 aaKnown RBP3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 POGZQ7Z3K3 1410 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 A0A0A6YYD4 124 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 IGKV6D-41A0A0C4DH26 115 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 A0A0J9YVX5 310 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 XKRY2A2RUG3 117 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 EFCAB7A8K855 629 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 ARPC1BO15143 372 aaKnown RBP3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 ERLIN1O75477 346 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 ASGR1P07306 291 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 RHOXF2BP0C7M4 288 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 HNRNPA2B1P22626 353 aaKnown RBP3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 MAGEA9P43362 315 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 MTTPP55157 894 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 DDX39BQ13838 428 aaKnown RBP3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 ZMYND11Q15326 602 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 CLPPQ16740 277 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 MICAQ29983 383 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 WDR88Q6ZMY6 472 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 STOX1Q6ZVD7 989 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 SLC22A16Q86VW1 577 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 AMZ2Q86W34 360 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 ERICH1Q86X53 443 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 NAXDQ8IW45 347 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 ZCCHC7Q8N3Z6 543 aaKnown RBP3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 OR13C2Q8NGS9 318 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 CRYGNQ8WXF5 182 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 CCDC51Q96ER9 411 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 DTD2Q96FN9 168 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 PPP1R16AQ96I34 528 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 TTC25Q96NG3 672 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 CPXM1Q96SM3 734 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 PLIN2Q99541 437 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 PAIP2Q9BPZ3 127 aaKnown RBP3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 RHOXF2Q9BQY4 288 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 CCDC77Q9BR77 488 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 GLRX2Q9NS18 164 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 ZNF446Q9NWS9 450 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 KCNN3Q9UGI6 736 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 PLEKHA6Q9Y2H5 1048 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 AGRNO00468 2067 aa3.71□□□□□ -1.82
HMGB1P38-201ENST00000490557 WDR19Q8NEZ3 1342 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 IGHV3OR16-12A0A075B7B8 117 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 A0A087WZY1 265 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 NPIPA5A0A0B4J1W7 369 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 FAM230AA0A1W2PPH8 454 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 FAM47DPA6NHR8 397 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 E9PBE3 544 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 NPIPA5E9PKD4 350 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 F8WDY8 70 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 H0YIV9 168 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 BUB1O43683 1085 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 PDE5AO76074 875 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 KRT8P05787 483 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 TPM1P09493 284 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 KLK2P20151 261 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 ACP1P24666 158 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 HOXD10P28358 340 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 TRIM23P36406 574 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 CD151P48509 253 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 NLRP11P59045 1033 aaKnown RBP3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 SRP54P61011 504 aaKnown RBP3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 NOP14P78316 857 aaKnown RBP3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 ARSKQ6UWY0 536 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 DLEU7Q6UYE1 221 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 SH2D6Q7Z4S9 175 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 ZNF573Q86YE8 665 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 BBS5Q8N3I7 341 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 DRAXINQ8NBI3 349 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 KLHL30-AS1Q8NEE0 82 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 OR52K1Q8NGK4 314 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 OR52J3Q8NH60 311 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 SELENOMQ8WWX9 145 aa3.7□□□□□ -1.82
HMGB1P38-201ENST00000490557 TMEM37Q8WXS4 190 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms