RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 DHTKD1Q96HY7 919 aaPredicted RBP3.45□□□□□ -1.86
CCDC39-206ENST00000489868 FTHL17Q9BXU8 183 aa3.45□□□□□ -1.86
CCDC39-206ENST00000489868 HOMER3Q9NSC5 361 aa3.45□□□□□ -1.86
CCDC39-206ENST00000489868 DUS2Q9NX74 493 aaKnown RBP3.45□□□□□ -1.86
CCDC39-206ENST00000489868 FETUBQ9UGM5 382 aa3.45□□□□□ -1.86
CCDC39-206ENST00000489868 TNRQ92752 1358 aa3.45□□□□□ -1.86
CCDC39-206ENST00000489868 H0YL77 283 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 TM9SF1O15321 606 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 ZNF254O75437 659 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 APBB3O95704 486 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 PGK1P00558 417 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 IGFBP1P08833 259 aaPredicted RBP3.44□□□□□ -1.86
CCDC39-206ENST00000489868 H2AFZP0C0S5 128 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 PSMB1P20618 241 aaKnown RBP3.44□□□□□ -1.86
CCDC39-206ENST00000489868 AHCYP23526 432 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 PRDX6P30041 224 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 MRPS6P82932 125 aaKnown RBP3.44□□□□□ -1.86
CCDC39-206ENST00000489868 FUT7Q11130 342 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 TMEM52BQ4KMG9 183 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 MEDAGQ5VYS4 303 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 WSCD1Q658N2 575 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 PAQR9Q6ZVX9 377 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 MOB1BQ7L9L4 216 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 TICAM2Q86XR7 235 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 ZNF713Q8N859 430 aaPredicted RBP3.44□□□□□ -1.86
CCDC39-206ENST00000489868 LEMD2Q8NC56 503 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 NEK11Q8NG66 645 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 ART4Q93070 314 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 NOL4LQ96MY1 436 aaPredicted RBP3.44□□□□□ -1.86
CCDC39-206ENST00000489868 ACAT2Q9BWD1 397 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 RPS6KB2Q9UBS0 482 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 PDE10AQ9Y233 779 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 EXOSC1Q9Y3B2 195 aaKnown RBP3.44□□□□□ -1.86
CCDC39-206ENST00000489868 STRAPQ9Y3F4 350 aaKnown RBP3.44□□□□□ -1.86
CCDC39-206ENST00000489868 USP6P35125 1406 aa3.44□□□□□ -1.86
CCDC39-206ENST00000489868 OR7A17O14581 309 aa3.43□□□□□ -1.86
CCDC39-206ENST00000489868 ACTL6AO96019 429 aa3.43□□□□□ -1.86
CCDC39-206ENST00000489868 JCHAINP01591 159 aa3.43□□□□□ -1.86
CCDC39-206ENST00000489868 PRB2P02812 416 aaPredicted RBP3.43□□□□□ -1.86
CCDC39-206ENST00000489868 MYBPC1Q00872 1141 aa3.43□□□□□ -1.86
CCDC39-206ENST00000489868 SRYQ05066 204 aa3.43□□□□□ -1.86
CCDC39-206ENST00000489868 DPYSL3Q14195 570 aa3.43□□□□□ -1.86
CCDC39-206ENST00000489868 SLC10A5Q5PT55 438 aa3.43□□□□□ -1.86
CCDC39-206ENST00000489868 SLC39A4Q6P5W5 647 aa3.43□□□□□ -1.86
CCDC39-206ENST00000489868 CXCL17Q6UXB2 119 aa3.43□□□□□ -1.86
CCDC39-206ENST00000489868 WDR88Q6ZMY6 472 aa3.43□□□□□ -1.86
CCDC39-206ENST00000489868 SNX32Q86XE0 403 aa3.43□□□□□ -1.86
CCDC39-206ENST00000489868 SLC25A36Q96CQ1 311 aa3.43□□□□□ -1.86
CCDC39-206ENST00000489868 CCDC43Q96MW1 224 aaKnown RBP3.43□□□□□ -1.86
CCDC39-206ENST00000489868 HES7Q9BYE0 225 aa3.43□□□□□ -1.86
CCDC39-206ENST00000489868 CCSER1Q9C0I3 900 aa3.43□□□□□ -1.86
CCDC39-206ENST00000489868 ABCG8Q9H221 673 aa3.43□□□□□ -1.86
CCDC39-206ENST00000489868 Q9H3A6 140 aa3.43□□□□□ -1.86
CCDC39-206ENST00000489868 IL20RAQ9UHF4 553 aa3.43□□□□□ -1.86
CCDC39-206ENST00000489868 ZNF221Q9UK13 617 aa3.43□□□□□ -1.86
CCDC39-206ENST00000489868 L3MBTL1Q9Y468 752 aa3.43□□□□□ -1.86
CCDC39-206ENST00000489868 RAI1Q7Z5J4 1906 aaPredicted RBP3.42□□□□□ -1.86
CCDC39-206ENST00000489868 DDX39AO00148 427 aaKnown RBP3.42□□□□□ -1.86
CCDC39-206ENST00000489868 WWP2O00308 870 aa3.42□□□□□ -1.86
CCDC39-206ENST00000489868 RAMP1O60894 148 aa3.42□□□□□ -1.86
CCDC39-206ENST00000489868 SLC35G4P0C7Q5 338 aa3.42□□□□□ -1.86
CCDC39-206ENST00000489868 PRDX2P32119 198 aa3.42□□□□□ -1.86
CCDC39-206ENST00000489868 LIM2P55344 173 aa3.42□□□□□ -1.86
CCDC39-206ENST00000489868 UBE2V2Q15819 145 aa3.42□□□□□ -1.86
CCDC39-206ENST00000489868 CYP51A1Q16850 503 aa3.42□□□□□ -1.86
CCDC39-206ENST00000489868 ETFRF1Q6IPR1 90 aa3.42□□□□□ -1.86
CCDC39-206ENST00000489868 P4HA3Q7Z4N8 544 aa3.42□□□□□ -1.86
CCDC39-206ENST00000489868 BATF2Q8N1L9 274 aa3.42□□□□□ -1.86
CCDC39-206ENST00000489868 CADM2Q8N3J6 435 aa3.42□□□□□ -1.86
CCDC39-206ENST00000489868 IMMP1LQ96LU5 166 aa3.42□□□□□ -1.86
CCDC39-206ENST00000489868 SYTL2Q9HCH5 934 aa3.42□□□□□ -1.86
CCDC39-206ENST00000489868 EHFQ9NZC4 300 aa3.42□□□□□ -1.86
CCDC39-206ENST00000489868 GHRLQ9UBU3 117 aa3.42□□□□□ -1.86
CCDC39-206ENST00000489868 KCNN3Q9UGI6 736 aa3.42□□□□□ -1.86
CCDC39-206ENST00000489868 IGKV6D-21A0A0A0MT36 114 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 SLC9B1P1A6NJY1 282 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 ALOX15BO15296 676 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 BCAS2O75934 225 aaPredicted RBP3.41□□□□□ -1.86
CCDC39-206ENST00000489868 NF2P35240 595 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 UGT1A3P35503 534 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 RPL4P36578 427 aaKnown RBP3.41□□□□□ -1.86
CCDC39-206ENST00000489868 HTR5AP47898 357 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 HERVK_113P63132 956 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 ERVK-8P63133 956 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 PLOD1Q02809 727 aaPredicted RBP3.41□□□□□ -1.86
CCDC39-206ENST00000489868 UBXN1Q04323 297 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 PSG7Q13046 419 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 CBX3Q13185 183 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 DPYSQ14117 519 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 KYAT1Q16773 422 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 FAM120AOSQ5T036 256 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 SPATA46Q5T0L3 261 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 IL23RQ5VWK5 629 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 OTPQ5XKR4 325 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 BTNL3Q6UXE8 466 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 TFAP2EQ6VUC0 442 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 STAC2Q6ZMT1 411 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 TRPM8Q7Z2W7 1104 aa3.41□□□□□ -1.86
CCDC39-206ENST00000489868 NET1Q7Z628 596 aaPredicted RBP3.41□□□□□ -1.86
CCDC39-206ENST00000489868 RABEPKQ7Z6M1 372 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms