RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 BOLA1Q9Y3E2 137 aa14.71□□□□□ -0.06
BRD9-208ENST00000489816 A0A1W2PQ09 198 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 ARRDC5A6NEK1 342 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 SOCS6O14544 535 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 TMCC2O75069 709 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 CCNKO75909 580 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 RAB36O95755 333 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 NR2F6P10588 404 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 CMPK1P30085 196 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 ACSL1P33121 698 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 COPZ1P61923 177 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 LRIT3Q3SXY7 679 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 C19orf48Q6RUI8 117 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 GLCCI1Q86VQ1 547 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 GHDCQ8N2G8 530 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 OR4Q3Q8NH05 313 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 ATP13A2Q9NQ11 1180 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 CES1P1Q9UKY3 287 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 CD8B2A6NJW9 211 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 K7EQS6 105 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 GNB5O14775 395 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 EMC8O43402 210 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 HRO43593 1189 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 MSL3P1P0C860 447 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 CD8BP10966 210 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 ADPRHP54922 357 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 CDH11P55287 796 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 DEFA1P59665 94 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 DEFA3P59666 94 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 ZIC1Q15915 447 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 FBXO46Q6PJ61 603 aaPredicted RBP14.7□□□□□ -0.06
BRD9-208ENST00000489816 BBS10Q8TAM1 723 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 DHRS1Q96LJ7 313 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 SAMD8Q96LT4 415 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 POLDIP3Q9BY77 421 aaKnown RBP14.7□□□□□ -0.06
BRD9-208ENST00000489816 CPNE5Q9HCH3 593 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 DDX28Q9NUL7 540 aaKnown RBP14.7□□□□□ -0.06
BRD9-208ENST00000489816 SEC14L4Q9UDX3 406 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 SLC7A7Q9UM01 511 aa14.7□□□□□ -0.06
BRD9-208ENST00000489816 PRSS38A1L453 326 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 EPOPA6NHQ4 379 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 SLITRK5O94991 958 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 CDK5Q00535 292 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 LARS2Q15031 903 aaKnown RBP14.69□□□□□ -0.06
BRD9-208ENST00000489816 CCDC85BQ15834 202 aaPredicted RBP14.69□□□□□ -0.06
BRD9-208ENST00000489816 KLHL12Q53G59 568 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 KIAA1324Q6UXG2 1013 aaKnown RBP14.69□□□□□ -0.06
BRD9-208ENST00000489816 FAM26EQ8N5C1 309 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 MINDY2Q8NBR6 621 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 SPATA5L1Q9BVQ7 753 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 C1QTNF2Q9BXJ5 285 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 SP140LQ9H930 580 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 SFXN1Q9H9B4 322 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 C3orf14Q9HBI5 128 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 ISPDA4D126 451 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 PEX12O00623 359 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 PRKNO60260 465 aaPredicted RBP14.69□□□□□ -0.06
BRD9-208ENST00000489816 GSTT2P0CG29 244 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 GSTT2BP0CG30 244 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 OR2B6P58173 313 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 ERVK-21P61565 698 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 FABP5Q01469 135 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 EXOSC7Q15024 291 aaKnown RBP14.69□□□□□ -0.06
BRD9-208ENST00000489816 MAPK14Q16539 360 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 DUSP5Q16690 384 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 ZNF776Q68DI1 518 aaPredicted RBP14.69□□□□□ -0.06
BRD9-208ENST00000489816 MRM1Q6IN84 353 aaKnown RBP14.69□□□□□ -0.06
BRD9-208ENST00000489816 BHLHB9Q6PI77 547 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 TRIM48Q8IWZ4 208 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 OR51G2Q8NGK0 314 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 HERVK_113Q902F9 699 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 FAM210AQ96ND0 272 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 OR2A14Q96R47 310 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 DPH1Q9BZG8 443 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 CRNNQ9UBG3 495 aaPredicted RBP14.69□□□□□ -0.06
BRD9-208ENST00000489816 WDR45Q9Y484 360 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 HYKKA2RU49 373 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 FABP12A6NFH5 140 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.69□□□□□ -0.06
BRD9-208ENST00000489816 ZNF670-ZNF695F2Z2N8 137 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 DDX5P17844 614 aaKnown RBP14.69□□□□□ -0.06
BRD9-208ENST00000489816 PPP1CAP62136 330 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 TMEM35AQ53FP2 167 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 PRRT3Q5FWE3 981 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 FBXO42Q6P3S6 717 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 RNF31Q96EP0 1072 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 ZNF681Q96N22 645 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 ANKHQ9HCJ1 492 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 NDUFB11Q9NX14 153 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 ADAM29Q9UKF5 820 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 CLCA2Q9UQC9 943 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 V9GYH0 126 aa14.69□□□□□ -0.06
BRD9-208ENST00000489816 A0A0G2JPF8 293 aa14.68□□□□□ -0.06
BRD9-208ENST00000489816 HNRNPCL2B2RXH8 293 aa14.68□□□□□ -0.06
BRD9-208ENST00000489816 HNRNPCL3B7ZW38 293 aa14.68□□□□□ -0.06
BRD9-208ENST00000489816 CASKO14936 926 aa14.68□□□□□ -0.06
BRD9-208ENST00000489816 PRICKLE3O43900 615 aaPredicted RBP14.68□□□□□ -0.06
BRD9-208ENST00000489816 LIMS3P0CW19 117 aa14.68□□□□□ -0.06
BRD9-208ENST00000489816 LIMS4P0CW20 117 aa14.68□□□□□ -0.06
BRD9-208ENST00000489816 HNRNPCL4P0DMR1 293 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms