RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 CCDC115Q96NT0 180 aa7.2□□□□□ -1.26
SSR1-210ENST00000489567 COL21A1Q96P44 957 aa7.2□□□□□ -1.26
SSR1-210ENST00000489567 FAM173AQ9BQD7 235 aa7.2□□□□□ -1.26
SSR1-210ENST00000489567 TMEM120AQ9BXJ8 343 aa7.2□□□□□ -1.26
SSR1-210ENST00000489567 TTTY12Q9BZ98 90 aa7.2□□□□□ -1.26
SSR1-210ENST00000489567 ZNF385DQ9H6B1 395 aa7.2□□□□□ -1.26
SSR1-210ENST00000489567 GALNT9Q9HCQ5 603 aa7.2□□□□□ -1.26
SSR1-210ENST00000489567 SLC52A3Q9NQ40 469 aa7.2□□□□□ -1.26
SSR1-210ENST00000489567 AGPAT4Q9NRZ5 378 aa7.2□□□□□ -1.26
SSR1-210ENST00000489567 FAM120CQ9NX05 1096 aaKnown RBP7.2□□□□□ -1.26
SSR1-210ENST00000489567 CNIH4Q9P003 139 aa7.2□□□□□ -1.26
SSR1-210ENST00000489567 CBLCQ9ULV8 474 aa7.2□□□□□ -1.26
SSR1-210ENST00000489567 NUP214P35658 2090 aaPredicted RBP7.2□□□□□ -1.26
SSR1-210ENST00000489567 RNF103-CHMP3A0A140T963 221 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 FAM166BA8MTA8 275 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 CAPN14A8MX76 684 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 NPIPA5E9PKD4 350 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 TP53I11O14683 189 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 ICOSLGO75144 302 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 TRIM3O75382 744 aaPredicted RBP7.19□□□□□ -1.26
SSR1-210ENST00000489567 CRYABP02511 175 aaKnown RBP7.19□□□□□ -1.26
SSR1-210ENST00000489567 GSNP06396 782 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 CELA3AP09093 270 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 CCDC159P0C7I6 412 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 CYP4B1P13584 511 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 ZNF24P17028 368 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 RFX3P48380 749 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 RPS6KA3P51812 740 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 POLR2JP52435 117 aaKnown RBP7.19□□□□□ -1.26
SSR1-210ENST00000489567 KCNK10P57789 538 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 KCNJ2P63252 427 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 MRPS22P82650 360 aaKnown RBP7.19□□□□□ -1.26
SSR1-210ENST00000489567 HSF1Q00613 529 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 ALDH6A1Q02252 535 aaKnown RBP7.19□□□□□ -1.26
SSR1-210ENST00000489567 ZNHIT3Q15649 155 aaPredicted RBP7.19□□□□□ -1.26
SSR1-210ENST00000489567 SWI5Q1ZZU3 235 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 GTDC1Q4AE62 458 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 CYP27C1Q4G0S4 372 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 CMPK2Q5EBM0 449 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 CCNJQ5T5M9 372 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 FIGNL1Q6PIW4 674 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 NUP54Q7Z3B4 507 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 C6orf120Q7Z4R8 191 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 TMEM251Q8N6I4 163 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 FAM98AQ8NCA5 519 aaKnown RBP7.19□□□□□ -1.26
SSR1-210ENST00000489567 GALNT11Q8NCW6 608 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 OR56A1Q8NGH5 318 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 OR52N2Q8NGI0 321 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 GOT1L1Q8NHS2 421 aaPredicted RBP7.19□□□□□ -1.26
SSR1-210ENST00000489567 SFXN5Q8TD22 340 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 RNF138Q8WVD3 245 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 STON2Q8WXE9 905 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 JADE3Q92613 823 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 CDS1Q92903 461 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 ZBTB18Q99592 522 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 DOHHQ9BU89 302 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 ANGPTL4Q9BY76 406 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 RTN4RQ9BZR6 473 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 Q9N2J8 555 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 CCDC167Q9P0B6 97 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 BTNL2Q9UIR0 455 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 VPS4AQ9UN37 437 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 NPIPA1Q9UND3 350 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.19□□□□□ -1.26
SSR1-210ENST00000489567 PRRC2CQ9Y520 2896 aaKnown RBP7.19□□□□□ -1.26
SSR1-210ENST00000489567 FAM234BA2RU67 622 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 ANKUB1A6NFN9 424 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 CCDC154A6NI56 674 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 KCNK2O95069 426 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 UNC5CO95185 931 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 WISP1O95388 367 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 IL33O95760 270 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 IL6P05231 212 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 EDN3P14138 238 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 CD53P19397 219 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 NCF2P19878 526 aaPredicted RBP7.19□□□□□ -1.26
SSR1-210ENST00000489567 CAPN3P20807 821 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 UQCRC2P22695 453 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 PTPN6P29350 595 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 IL12BP29460 328 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 MAGEA5P43359 124 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 PRIM2P49643 509 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 SEC24CP53992 1094 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 PNLIPRP2P54317 469 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 GAS1P54826 345 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 PPIAP62937 165 aaKnown RBP7.19□□□□□ -1.26
SSR1-210ENST00000489567 RCAN2Q14206 197 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 DECR1Q16698 335 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 EIF2S3LQ2VIR3 472 aaKnown RBP7.19□□□□□ -1.26
SSR1-210ENST00000489567 AGKQ53H12 422 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 SAXO2Q658L1 398 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 CDC73Q6P1J9 531 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 ZCCHC12Q6PEW1 402 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 SLC2A7Q6PXP3 512 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 BLOC1S3Q6QNY0 202 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 APOOLQ6UXV4 268 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 GK5Q6ZS86 529 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 OLIG3Q7RTU3 272 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 FGD2Q7Z6J4 655 aa7.19□□□□□ -1.26
SSR1-210ENST00000489567 CHERPQ8IWX8 916 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms