RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 ITCHQ96J02 903 aa9.73□□□□□ -0.85
SCAMP4-208ENST00000489554 BBS4Q96RK4 519 aa9.73□□□□□ -0.85
SCAMP4-208ENST00000489554 CPPED1Q9BRF8 314 aaPredicted RBP9.73□□□□□ -0.85
SCAMP4-208ENST00000489554 THTPAQ9BU02 230 aa9.73□□□□□ -0.85
SCAMP4-208ENST00000489554 TRIM8Q9BZR9 551 aa9.73□□□□□ -0.85
SCAMP4-208ENST00000489554 ANKRA2Q9H9E1 313 aa9.73□□□□□ -0.85
SCAMP4-208ENST00000489554 LIN28AQ9H9Z2 209 aaKnown RBP9.73□□□□□ -0.85
SCAMP4-208ENST00000489554 CXorf21Q9HAI6 301 aa9.73□□□□□ -0.85
SCAMP4-208ENST00000489554 GPATCH2Q9NW75 528 aa9.73□□□□□ -0.85
SCAMP4-208ENST00000489554 TAS2R9Q9NYW1 312 aa9.73□□□□□ -0.85
SCAMP4-208ENST00000489554 STOML1Q9UBI4 398 aa9.73□□□□□ -0.85
SCAMP4-208ENST00000489554 PSME2Q9UL46 239 aa9.73□□□□□ -0.85
SCAMP4-208ENST00000489554 ENTPD4Q9Y227 616 aa9.73□□□□□ -0.85
SCAMP4-208ENST00000489554 ZNF780BQ9Y6R6 833 aa9.73□□□□□ -0.85
SCAMP4-208ENST00000489554 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 OR6C76A6NM76 312 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 ACOT7O00154 380 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 PLOD2O00469 737 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 RFXANKO14593 260 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 ERN1O75460 977 aaKnown RBP9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 CPSF4O95639 269 aaKnown RBP9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 CBX7O95931 251 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 IFI6P09912 130 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 ABOP16442 354 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 SLC6A2P23975 617 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 NTSP30990 170 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 MPIP34949 423 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 MC3RP41968 323 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 MANFP55145 182 aaKnown RBP9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 GPR85P60893 370 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 MRPS35P82673 323 aaKnown RBP9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 LRRC74AQ0VAA2 488 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 HSPB3Q12988 150 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 NFYCQ13952 458 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 ZNF267Q14586 743 aaPredicted RBP9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 C3AR1Q16581 482 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 MMEL1Q495T6 779 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 SPATS1Q496A3 300 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 TRMT12Q53H54 448 aaKnown RBP9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 RUNDC3AQ59EK9 446 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 PIGGQ5H8A4 983 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 RNFT1Q5M7Z0 435 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 RNF111Q6ZNA4 994 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 SLC29A4Q7RTT9 530 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 ZGRF1Q86YA3 2104 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 C9orf40Q8IXQ3 194 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 DND1Q8IYX4 353 aaKnown RBP9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 SAMD14Q8IZD0 417 aaPredicted RBP9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 SLC34A3Q8N130 599 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 EID3Q8N140 333 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 ZNF808Q8N4W9 903 aaPredicted RBP9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 SLC15A4Q8N697 577 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 ADCY4Q8NFM4 1077 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 OR4A15Q8NGL6 344 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 ZFP90Q8TF47 636 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 KAT2AQ92830 837 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 ROPN1LQ96C74 230 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 LRRC58Q96CX6 371 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 ELP4Q96EB1 424 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 FAM120BQ96EK7 910 aaKnown RBP9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 GIMAP5Q96F15 307 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 CCDC120Q96HB5 630 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 PANX1Q96RD7 426 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 CGREF1Q99674 301 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 CNPPD1Q9BV87 410 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 SERHL2Q9H4I8 314 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 RMND5AQ9H871 391 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 RNPEPL1Q9HAU8 725 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 IL1RL2Q9HB29 575 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 CMTM6Q9NX76 183 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 GMPR2Q9P2T1 348 aaKnown RBP9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 ABCD2Q9UBJ2 740 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 SH3BGRL2Q9UJC5 107 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 TINAGQ9UJW2 476 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 ERVK-19Q9WJR5 959 aa9.72□□□□□ -0.85
SCAMP4-208ENST00000489554 A0A087WV62 115 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 UPK1AO00322 258 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 NME4O00746 187 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 PRRG2O14669 202 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 HS6ST1O60243 411 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 PLOD3O60568 738 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 KCNH1O95259 989 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 NPPAP01160 153 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 ABCB1P08183 1280 aaPredicted RBP9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 DDX5P17844 614 aaKnown RBP9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 CNR1P21554 472 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 DCTP40126 519 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 GZMMP51124 257 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 SLC37A1P57057 533 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 FUT7Q11130 342 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 MAP4K2Q12851 820 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 RABL3Q5HYI8 236 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 C6orf10Q5SRN2 563 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 SAXO2Q658L1 398 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 NANOGP8Q6NSW7 305 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 TMEM107Q6UX40 140 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 TMEM64Q6YI46 380 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 GALNT12Q8IXK2 581 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 SLC15A3Q8IY34 581 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 ULK2Q8IYT8 1036 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms