RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 RTN4RQ9BZR6 473 aa11.19□□□□□ -0.62
CPSF3-204ENST00000489403 STMN4Q9H169 189 aaPredicted RBP11.19□□□□□ -0.62
CPSF3-204ENST00000489403 OPN3Q9H1Y3 402 aaPredicted RBP11.19□□□□□ -0.62
CPSF3-204ENST00000489403 DSN1Q9H410 356 aa11.19□□□□□ -0.62
CPSF3-204ENST00000489403 ZNF395Q9H8N7 513 aaPredicted RBP11.19□□□□□ -0.62
CPSF3-204ENST00000489403 GIMAP4Q9NUV9 329 aa11.19□□□□□ -0.62
CPSF3-204ENST00000489403 TAS2R9Q9NYW1 312 aa11.19□□□□□ -0.62
CPSF3-204ENST00000489403 FLRT3Q9NZU0 649 aa11.19□□□□□ -0.62
CPSF3-204ENST00000489403 SENP1Q9P0U3 644 aa11.19□□□□□ -0.62
CPSF3-204ENST00000489403 PPP4R1LQ9P1A2 415 aa11.19□□□□□ -0.62
CPSF3-204ENST00000489403 DMGDHQ9UI17 866 aaKnown RBP11.19□□□□□ -0.62
CPSF3-204ENST00000489403 OR10H1Q9Y4A9 318 aa11.19□□□□□ -0.62
CPSF3-204ENST00000489403 RAI1Q7Z5J4 1906 aaPredicted RBP11.19□□□□□ -0.62
CPSF3-204ENST00000489403 PCNX3Q9H6A9 2034 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 A0A087WUV0 522 aaPredicted RBP11.18□□□□□ -0.62
CPSF3-204ENST00000489403 DLX3O60479 287 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 COQ9O75208 318 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 HEXAP06865 529 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 SNRPAP09012 282 aaKnown RBP11.18□□□□□ -0.62
CPSF3-204ENST00000489403 POU2F1P14859 743 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 HK1P19367 917 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 TAC1P20366 129 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 CRYGSP22914 178 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 GCAP28676 217 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 MPIP34949 423 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 CD79BP40259 229 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 MC3RP41968 323 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 PCYT1AP49585 367 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 SUCLG1P53597 346 aaKnown RBP11.18□□□□□ -0.62
CPSF3-204ENST00000489403 MRPS22P82650 360 aaKnown RBP11.18□□□□□ -0.62
CPSF3-204ENST00000489403 GANABQ14697 944 aaKnown RBP11.18□□□□□ -0.62
CPSF3-204ENST00000489403 SH2D4BQ5SQS7 431 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 RAET1LQ5VY80 246 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 GALNT18Q6P9A2 607 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 P3H2Q8IVL5 708 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 LRRC75A-AS1Q8N1F1 130 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 MEIOBQ8N635 442 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 OR5M1Q8NGP8 315 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 IFT81Q8WYA0 676 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 ARSGQ96EG1 525 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 PIK3IP1Q96FE7 263 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 PGM2Q96G03 612 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 KCNA7Q96RP8 456 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 PINK1Q9BXM7 581 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 TSPYL1Q9H0U9 437 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 ZNF226Q9NYT6 803 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 MED11Q9P086 117 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 ZNF337Q9Y3M9 751 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 TIMM22Q9Y584 194 aa11.18□□□□□ -0.62
CPSF3-204ENST00000489403 A0A087WV62 115 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 MYO1GB0I1T2 1018 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 H3BML4 177 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 SEC14L5O43304 696 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 ARHGEF9O43307 516 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 FADS1O60427 444 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 SMPD2O60906 423 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 TNFRSF21O75509 655 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 PSMG1O95456 288 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 CGAP01215 116 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 JUNP05412 331 aaKnown RBP11.17□□□□□ -0.62
CPSF3-204ENST00000489403 DDCP20711 480 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 IMPDH1P20839 514 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 ATP5F1P24539 256 aaPredicted RBP11.17□□□□□ -0.62
CPSF3-204ENST00000489403 UGT2B10P36537 528 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 GSTM5P46439 218 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 NCBP2P52298 156 aaKnown RBP eCLIP11.17□□□□□ -0.62
CPSF3-204ENST00000489403 BTKQ06187 659 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 ZNF763Q0D2J5 394 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 STX5Q13190 355 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 ACKR1Q16570 336 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 TMEM107Q6UX40 140 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 TIFABQ6ZNK6 161 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 ZNF550Q7Z398 422 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 CIARTQ8N365 385 aaPredicted RBP11.17□□□□□ -0.62
CPSF3-204ENST00000489403 MMGT1Q8N4V1 131 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 PIGTQ969N2 578 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 ZNF845Q96IR2 970 aaPredicted RBP11.17□□□□□ -0.62
CPSF3-204ENST00000489403 COX4I2Q96KJ9 171 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 MARK4Q96L34 752 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 HS3ST6Q96QI5 342 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 BBS4Q96RK4 519 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 MED18Q9BUE0 208 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 SHCBP1LQ9BZQ2 653 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 RNF122Q9H9V4 155 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 UBTD1Q9HAC8 227 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 SIRT5Q9NXA8 310 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 NFU1Q9UMS0 254 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 ABCG2Q9UNQ0 655 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 STK38LQ9Y2H1 464 aa11.17□□□□□ -0.62
CPSF3-204ENST00000489403 EXOC1LA0A1B0GW35 172 aa11.16□□□□□ -0.62
CPSF3-204ENST00000489403 SERTM1A2A2V5 107 aa11.16□□□□□ -0.62
CPSF3-204ENST00000489403 OR2M5A3KFT3 312 aa11.16□□□□□ -0.62
CPSF3-204ENST00000489403 UPK1AO00322 258 aa11.16□□□□□ -0.62
CPSF3-204ENST00000489403 EMC8O43402 210 aa11.16□□□□□ -0.62
CPSF3-204ENST00000489403 URI1O94763 535 aaPredicted RBP11.16□□□□□ -0.62
CPSF3-204ENST00000489403 LY6G6DO95868 133 aa11.16□□□□□ -0.62
CPSF3-204ENST00000489403 ENO1P06733 434 aaKnown RBP11.16□□□□□ -0.62
CPSF3-204ENST00000489403 ANXA4P09525 319 aaPredicted RBP11.16□□□□□ -0.62
CPSF3-204ENST00000489403 CD8BP10966 210 aa11.16□□□□□ -0.62
CPSF3-204ENST00000489403 LOXP28300 417 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms