RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 DNASE1P24855 282 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 EVI2BP34910 448 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 MC3RP41968 323 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 LHX2P50458 406 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 GAS1P54826 345 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 EEFSECP57772 596 aaKnown RBP12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 SORDQ00796 357 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 BCL2A1Q16548 175 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 TMEM107Q6UX40 140 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 IKBIPQ70UQ0 350 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 CDC20BQ86Y33 519 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 TDRPQ86YL5 185 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 OR2L13Q8N349 312 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 CHDHQ8NE62 594 aaPredicted RBP12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 LINC01560Q8TB33 94 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 RNF138Q8WVD3 245 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 INTS12Q96CB8 462 aaKnown RBP12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 TRIM44Q96DX7 344 aaPredicted RBP12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 ELP4Q96EB1 424 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 RBM24Q9BX46 236 aaKnown RBP12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 PIGMQ9H3S5 423 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 DSN1Q9H410 356 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 GLIPR2Q9H4G4 154 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 PTGES2Q9H7Z7 377 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 Q9N2J8 555 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 MID2Q9UJV3 735 aa12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 RPH3AQ9Y2J0 694 aaPredicted RBP12.19□□□□□ -0.46
CTDSP1-208ENST00000482272 SMIM23A6NLE4 172 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 TTC36A6NLP5 189 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 LINC01387J3KSC0 135 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 RGS14O43566 566 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 SCO2O43819 266 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 FADS1O60427 444 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 ZIC3O60481 467 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 GOSR1O95249 250 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 KRT4P19013 534 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 PRPH2P23942 346 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 CPA2P48052 419 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 DIO3P55073 304 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 CLDN18P56856 261 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 FOXF2Q12947 444 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 KIAA0040Q15053 153 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 LIPMQ5VYY2 423 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 P4HA3Q7Z4N8 544 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 LUZP2Q86TE4 346 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 GRAMD2AQ8IUY3 354 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.18□□□□□ -0.465e-15■■■■■ 523.3
CTDSP1-208ENST00000482272 AMDHD1Q96NU7 426 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 YIPF4Q9BSR8 244 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 LIME1Q9H400 295 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 C1orf109Q9NX04 203 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 FLRT3Q9NZU0 649 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 CLCF1Q9UBD9 225 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 ABCG2Q9UNQ0 655 aa12.18□□□□□ -0.46
CTDSP1-208ENST00000482272 NPIPB8E9PQR5 432 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 CASKO14936 926 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 KCNH1O95259 989 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 IL33O95760 270 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 CHEK2O96017 543 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 IFI6P09912 130 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 PRPS2P11908 318 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 CD99P14209 185 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 HK1P19367 917 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 GPC1P35052 558 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 RFX3P48380 749 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 GANABQ14697 944 aaKnown RBP12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 CLEC6AQ6EIG7 209 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 OR2A2Q6IF42 318 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 CAMKMTQ7Z624 323 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 C4orf33Q8N1A6 199 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 MEIOBQ8N635 442 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 FADS6Q8N9I5 356 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 OR2M3Q8NG83 312 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 OR2T11Q8NH01 316 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 OR2W6PQ8NHA6 318 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 DUSP19Q8WTR2 217 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 EGLN2Q96KS0 407 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 LMF2Q9BU23 707 aaKnown RBP12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 G6PC3Q9BUM1 346 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 RTN4RQ9BZR6 473 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 CXXC4Q9H2H0 198 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 ANKZF1Q9H8Y5 726 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 LRTM1Q9HBL6 345 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 FAM120CQ9NX05 1096 aaKnown RBP12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 MED11Q9P086 117 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 NDRG3Q9UGV2 375 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 DOCK7Q96N67 2140 aa12.17□□□□□ -0.46
CTDSP1-208ENST00000482272 PCNX3Q9H6A9 2034 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 AZIN1O14977 448 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 TRIM13O60858 407 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 PSMG1O95456 288 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 CRHP06850 196 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 TCEA1P23193 301 aaKnown RBP12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 GABRA3P34903 492 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 PPP2R2AP63151 447 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 SLC18A2Q05940 514 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 C17orf67Q0P5P2 114 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 PCLAFQ15004 111 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 GLYR1Q49A26 553 aaPredicted RBP12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 VPS26BQ4G0F5 336 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms